RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 WFDC12Q8WWY7 111 aa7.05□□□□□ -1.28
TTC3-220ENST00000487711 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
TTC3-220ENST00000487711 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
TTC3-220ENST00000487711 MSTNO14793 375 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 ALX3O95076 343 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 CYP11A1P05108 521 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 TPTE2Q6XPS3 522 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.04□□□□□ -1.28
TTC3-220ENST00000487711 TMC4Q7Z404 712 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 TXNRD3Q86VQ6 643 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 AGGF1Q8N302 714 aaeCLIP7.04□□□□□ -1.284e-10■■□□□ 13.7
TTC3-220ENST00000487711 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 TMEM39AQ9NV64 488 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 PPM1HQ9ULR3 514 aa7.04□□□□□ -1.28
TTC3-220ENST00000487711 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 FBXO24O75426 580 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 GLB1P16278 677 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 NOS3P29474 1203 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 ITGAEP38570 1179 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 KIAA1211Q6ZU35 1233 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 CORO1BQ9BR76 489 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 RUSC1Q9BVN2 902 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 CEP44Q9C0F1 390 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
TTC3-220ENST00000487711 TTF2Q9UNY4 1162 aaKnown RBP7.03□□□□□ -1.28
TTC3-220ENST00000487711 SORBS3O60504 671 aa7.02□□□□□ -1.29
TTC3-220ENST00000487711 IGHA1P01876 353 aa7.02□□□□□ -1.29
TTC3-220ENST00000487711 MAOBP27338 520 aa7.02□□□□□ -1.29
TTC3-220ENST00000487711 AP3B2Q13367 1082 aa7.02□□□□□ -1.29
TTC3-220ENST00000487711 POU4F3Q15319 338 aa7.02□□□□□ -1.29
TTC3-220ENST00000487711 TRIM56Q9BRZ2 755 aaKnown RBP7.02□□□□□ -1.29
TTC3-220ENST00000487711 PROCP04070 461 aa7.01□□□□□ -1.29
TTC3-220ENST00000487711 ZNF16P17020 682 aaPredicted RBP7.01□□□□□ -1.29
TTC3-220ENST00000487711 NRSN2Q9GZP1 204 aa7.01□□□□□ -1.29
TTC3-220ENST00000487711 RNF208Q9H0X6 261 aa7.01□□□□□ -1.29
TTC3-220ENST00000487711 PODXL2Q9NZ53 605 aa7.01□□□□□ -1.29
TTC3-220ENST00000487711 HP1BP3Q5SSJ5 553 aaPredicted RBP7□□□□□ -1.29
TTC3-220ENST00000487711 NUTM2GQ5VZR2 741 aa7□□□□□ -1.29
TTC3-220ENST00000487711 FDX2Q6P4F2 183 aa7□□□□□ -1.29
TTC3-220ENST00000487711 CEP41Q9BYV8 373 aa7□□□□□ -1.29
TTC3-220ENST00000487711 ENC1O14682 589 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 ECEL1O95672 775 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 DLGAP3O95886 979 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 SULF2Q8IWU5 870 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 MEGF10Q96KG7 1140 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 NECAB3Q96P71 396 aaPredicted RBP6.99□□□□□ -1.29
TTC3-220ENST00000487711 ZC3H12CQ9C0D7 883 aaKnown RBP6.99□□□□□ -1.29
TTC3-220ENST00000487711 SAMM50Q9Y512 469 aa6.99□□□□□ -1.29
TTC3-220ENST00000487711 MEGF11A6BM72 1044 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 SART1O43290 800 aaKnown RBP6.98□□□□□ -1.29
TTC3-220ENST00000487711 CTSBP07858 339 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 NME2P22392 152 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 DOC2BQ14184 412 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 CCDC85BQ15834 202 aaPredicted RBP6.98□□□□□ -1.29
TTC3-220ENST00000487711 EXOSC6Q5RKV6 272 aaKnown RBP6.98□□□□□ -1.29
TTC3-220ENST00000487711 MEI1Q5TIA1 1274 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 ANKRD34AQ69YU3 496 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 Q6ZS46 218 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 RGS22Q8NE09 1264 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 ANKRD24Q8TF21 1146 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 TP53INP1Q96A56 240 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 CRELD1Q96HD1 420 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 TMPRSS13Q9BYE2 586 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 RAD18Q9NS91 495 aa6.98□□□□□ -1.29
TTC3-220ENST00000487711 RBM47A0AV96 593 aaKnown RBP6.97□□□□□ -1.29
TTC3-220ENST00000487711 PAGE1O75459 146 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 CELA3AP09093 270 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 GSTP1P09211 210 aaKnown RBP6.97□□□□□ -1.29
TTC3-220ENST00000487711 CTSHP09668 335 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 ARNTP27540 789 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
TTC3-220ENST00000487711 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
TTC3-220ENST00000487711 C12orf50Q8NA57 414 aaPredicted RBP6.97□□□□□ -1.29
TTC3-220ENST00000487711 KCNB2Q92953 911 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 EMILIN2Q9BXX0 1053 aa6.97□□□□□ -1.29
TTC3-220ENST00000487711 HNRNPUQ00839 825 aaKnown RBP eCLIP6.96□□□□□ -1.3
TTC3-220ENST00000487711 SMG8Q8ND04 991 aaKnown RBP6.96□□□□□ -1.3
TTC3-220ENST00000487711 STK35Q8TDR2 534 aa6.96□□□□□ -1.3
TTC3-220ENST00000487711 UBL7Q96S82 380 aaPredicted RBP6.96□□□□□ -1.3
TTC3-220ENST00000487711 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
TTC3-220ENST00000487711 GAS2O43903 313 aaKnown RBP6.95□□□□□ -1.3
TTC3-220ENST00000487711 ST13P50502 369 aaKnown RBP6.95□□□□□ -1.3
TTC3-220ENST00000487711 AKAP4Q5JQC9 854 aa6.95□□□□□ -1.3
TTC3-220ENST00000487711 PCNX4Q63HM2 1172 aa6.95□□□□□ -1.3
TTC3-220ENST00000487711 MAP1SQ66K74 1059 aaPredicted RBP6.95□□□□□ -1.3
TTC3-220ENST00000487711 PDZD3Q86UT5 571 aa6.95□□□□□ -1.3
TTC3-220ENST00000487711 CCDC86Q9H6F5 360 aaKnown RBP6.95□□□□□ -1.3
TTC3-220ENST00000487711 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
TTC3-220ENST00000487711 DRD2P14416 443 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 LIG1P18858 919 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 BMP6P22004 513 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 PREPP48147 710 aa6.94□□□□□ -1.3
TTC3-220ENST00000487711 MRPL58Q14197 206 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms