RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 TCP10L2B9ZVM9 353 aa25.57■■□□□ 1.68
CHRD-215ENST00000485883 VPS37DQ86XT2 251 aa25.57■■□□□ 1.68
CHRD-215ENST00000485883 UNCXA6NJT0 531 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 TNFAIP1Q13829 316 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 ANKRD13AQ8IZ07 590 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 TMEM39BQ9GZU3 492 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 USP44Q9H0E7 712 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 PTPRCP08575 1304 aa25.56■■□□□ 1.68
CHRD-215ENST00000485883 PDE8BO95263 885 aa25.55■■□□□ 1.68
CHRD-215ENST00000485883 BCAMP50895 628 aa25.55■■□□□ 1.68
CHRD-215ENST00000485883 PTPN18Q99952 460 aa25.55■■□□□ 1.68
CHRD-215ENST00000485883 ELP3Q9H9T3 547 aa25.55■■□□□ 1.68
CHRD-215ENST00000485883 E9PSI1 815 aa25.54■■□□□ 1.68
CHRD-215ENST00000485883 CNKSR2Q8WXI2 1034 aa25.54■■□□□ 1.68
CHRD-215ENST00000485883 PDE4DIPQ5VU43 2346 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 CCER2I3L3R5 266 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 FRAT2O75474 233 aaPredicted RBP25.53■■□□□ 1.68
CHRD-215ENST00000485883 CACNB3P54284 484 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 CAVIN4Q5BKX8 364 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.53■■□□□ 1.68
CHRD-215ENST00000485883 OPTNQ96CV9 577 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 TRIM17Q9Y577 477 aa25.53■■□□□ 1.68
CHRD-215ENST00000485883 ARAP2Q8WZ64 1704 aa25.52■■□□□ 1.68
CHRD-215ENST00000485883 HTTP42858 3142 aa25.52■■□□□ 1.68
CHRD-215ENST00000485883 SLFN5Q08AF3 891 aa25.52■■□□□ 1.68
CHRD-215ENST00000485883 CRHR2Q13324 411 aa25.52■■□□□ 1.68
CHRD-215ENST00000485883 TESPA1A2RU30 521 aaPredicted RBP25.51■■□□□ 1.67
CHRD-215ENST00000485883 OTOP1Q7RTM1 612 aa25.51■■□□□ 1.67
CHRD-215ENST00000485883 CDCA7LQ96GN5 454 aa25.51■■□□□ 1.67
CHRD-215ENST00000485883 OTOFQ9HC10 1997 aa25.51■■□□□ 1.67
CHRD-215ENST00000485883 FGFR2P21802 821 aa25.5■■□□□ 1.67
CHRD-215ENST00000485883 RFX5P48382 616 aaPredicted RBP25.5■■□□□ 1.67
CHRD-215ENST00000485883 TBC1D22AQ8WUA7 517 aa25.5■■□□□ 1.67
CHRD-215ENST00000485883 MS4A4AQ96JQ5 239 aa25.5■■□□□ 1.67
CHRD-215ENST00000485883 LAMB1P07942 1786 aa25.49■■□□□ 1.67
CHRD-215ENST00000485883 TNNI2P48788 182 aa25.49■■□□□ 1.67
CHRD-215ENST00000485883 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
CHRD-215ENST00000485883 CAP1Q01518 475 aa25.49■■□□□ 1.67
CHRD-215ENST00000485883 VGLL4Q14135 290 aa25.49■■□□□ 1.67
CHRD-215ENST00000485883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.49■■□□□ 1.67
CHRD-215ENST00000485883 TEKT1Q969V4 418 aa25.49■■□□□ 1.67
CHRD-215ENST00000485883 MAP3K9P80192 1104 aa25.48■■□□□ 1.67
CHRD-215ENST00000485883 PUM3Q15397 648 aaKnown RBP25.48■■□□□ 1.67
CHRD-215ENST00000485883 OTUD7BQ6GQQ9 843 aa25.48■■□□□ 1.67
CHRD-215ENST00000485883 CD99L2Q8TCZ2 262 aa25.48■■□□□ 1.67
CHRD-215ENST00000485883 IFIT1P09914 478 aaKnown RBP25.47■■□□□ 1.67
CHRD-215ENST00000485883 APOBEC3HQ6NTF7 200 aaKnown RBP25.47■■□□□ 1.67
CHRD-215ENST00000485883 BRI3BPQ8WY22 251 aa25.47■■□□□ 1.67
CHRD-215ENST00000485883 ZDHHC15Q96MV8 337 aa25.47■■□□□ 1.67
CHRD-215ENST00000485883 CENPFP49454 3210 aa25.46■■□□□ 1.67
CHRD-215ENST00000485883 EYA2O00167 538 aa25.46■■□□□ 1.67
CHRD-215ENST00000485883 ALDH1L2Q3SY69 923 aa25.45■■□□□ 1.66
CHRD-215ENST00000485883 ATG9AQ7Z3C6 839 aa25.45■■□□□ 1.66
CHRD-215ENST00000485883 ERO1AQ96HE7 468 aa25.45■■□□□ 1.66
CHRD-215ENST00000485883 SMC4Q9NTJ3 1288 aa25.45■■□□□ 1.66
CHRD-215ENST00000485883 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
CHRD-215ENST00000485883 OTUD5Q96G74 571 aa25.44■■□□□ 1.66
CHRD-215ENST00000485883 MRIQ9BWK5 157 aa25.44■■□□□ 1.66
CHRD-215ENST00000485883 CCL15-CCL14A0A0B4J2E2 113 aa25.43■■□□□ 1.66
CHRD-215ENST00000485883 SP3Q02447 781 aa25.43■■□□□ 1.66
CHRD-215ENST00000485883 CCL15Q16663 113 aa25.43■■□□□ 1.66
CHRD-215ENST00000485883 PTPN22Q9Y2R2 807 aa25.43■■□□□ 1.66
CHRD-215ENST00000485883 CSADQ9Y600 493 aa25.43■■□□□ 1.66
CHRD-215ENST00000485883 MKI67P46013 3256 aaKnown RBP25.42■■□□□ 1.66
CHRD-215ENST00000485883 SLC5A1P13866 664 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 FAM43AQ8N2R8 423 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 LPIN2Q92539 896 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 SIL1Q9H173 461 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 TMOD2Q9NZR1 351 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 SUGT1Q9Y2Z0 365 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 SNCAIPQ9Y6H5 919 aa25.42■■□□□ 1.66
CHRD-215ENST00000485883 POTEFA5A3E0 1075 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 GTF2A2P52657 109 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 PRPF38BQ5VTL8 546 aaKnown RBP25.41■■□□□ 1.66
CHRD-215ENST00000485883 HHIPL2Q6UWX4 724 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 FAM83AQ86UY5 434 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 TRMT2AQ8IZ69 625 aaKnown RBP25.41■■□□□ 1.66
CHRD-215ENST00000485883 ZKSCAN4Q969J2 545 aaPredicted RBP25.41■■□□□ 1.66
CHRD-215ENST00000485883 WRNIP1Q96S55 665 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 EFCC1Q9HA90 598 aa25.41■■□□□ 1.66
CHRD-215ENST00000485883 MAST3O60307 1309 aa25.4■■□□□ 1.66
CHRD-215ENST00000485883 SPDYE5A6NIY4 337 aa25.4■■□□□ 1.66
CHRD-215ENST00000485883 NOB1Q9ULX3 412 aaKnown RBP25.4■■□□□ 1.66
CHRD-215ENST00000485883 UBTFL1P0CB47 393 aaPredicted RBP25.39■■□□□ 1.66
CHRD-215ENST00000485883 TAF1CQ15572 869 aaPredicted RBP25.39■■□□□ 1.66
CHRD-215ENST00000485883 FKBP1CQ5VVH2 108 aa25.39■■□□□ 1.66
CHRD-215ENST00000485883 MIGA2Q7L4E1 593 aa25.39■■□□□ 1.66
CHRD-215ENST00000485883 WDR66Q8TBY9 1149 aa25.39■■□□□ 1.66
CHRD-215ENST00000485883 BRCA2P51587 3418 aa25.38■■□□□ 1.65
CHRD-215ENST00000485883 DIXDC1Q155Q3 683 aa25.38■■□□□ 1.65
CHRD-215ENST00000485883 DIEXFQ68CQ4 756 aaKnown RBP25.38■■□□□ 1.65
CHRD-215ENST00000485883 IRF6O14896 467 aa25.37■■□□□ 1.65
CHRD-215ENST00000485883 PRDX5P30044 214 aa25.37■■□□□ 1.65
CHRD-215ENST00000485883 ZFYVE28Q9HCC9 887 aa25.37■■□□□ 1.65
CHRD-215ENST00000485883 PA2G4Q9UQ80 394 aaKnown RBP25.37■■□□□ 1.65
CHRD-215ENST00000485883 DAGLAQ9Y4D2 1042 aa25.37■■□□□ 1.65
CHRD-215ENST00000485883 ATP2B3Q16720 1220 aa25.36■■□□□ 1.65
CHRD-215ENST00000485883 ERO1BQ86YB8 467 aa25.36■■□□□ 1.65
CHRD-215ENST00000485883 LRRFIP2Q9Y608 721 aaKnown RBP25.36■■□□□ 1.65
CHRD-215ENST00000485883 CIAO1O76071 339 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms