RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 MYRFLQ96LU7 910 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 TRIM56Q9BRZ2 755 aaKnown RBP8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 RAXQ9Y2V3 346 aa8.5□□□□□ -1.05
SMARCC1-207ENST00000485833 POU4F3Q15319 338 aa8.49□□□□□ -1.05
SMARCC1-207ENST00000485833 SMG8Q8ND04 991 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-207ENST00000485833 CYP4F12Q9HCS2 524 aa8.49□□□□□ -1.05
SMARCC1-207ENST00000485833 PPP4R2Q9NY27 417 aa8.49□□□□□ -1.05
SMARCC1-207ENST00000485833 LOC100996750A0A140TA64 210 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 XRCC5P13010 732 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 MAOBP27338 520 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 FAAP100Q0VG06 881 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 EXOSC6Q5RKV6 272 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 ALG1LQ6GMV1 187 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
SMARCC1-207ENST00000485833 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 TIAF1O95411 115 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 P4HBP07237 508 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 CTSBP07858 339 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 FSTP19883 344 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 AP3B2Q13367 1082 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 FAM20CQ8IXL6 584 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
SMARCC1-207ENST00000485833 C12orf50Q8NA57 414 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-207ENST00000485833 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
SMARCC1-207ENST00000485833 GSC2O15499 205 aa8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 BMP3P12645 472 aa8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 ZNF157P51786 506 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 SRCIN1Q9C0H9 1055 aa8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-207ENST00000485833 ECEL1O95672 775 aa8.44□□□□□ -1.06
SMARCC1-207ENST00000485833 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
SMARCC1-207ENST00000485833 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
SMARCC1-207ENST00000485833 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
SMARCC1-207ENST00000485833 GIPC1O14908 333 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 LDHBP07195 334 aaKnown RBP8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 ADH5P11766 374 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 GSTT1P30711 240 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 SOX4Q06945 474 aaPredicted RBP8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 COL19A1Q14993 1142 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 BEND4Q6ZU67 534 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 CLEC10AQ8IUN9 316 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
SMARCC1-207ENST00000485833 HMX2A2RU54 273 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 ANKRD33BA6NCL7 494 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 DRD2P14416 443 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 PDE3AQ14432 1141 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 SGO2Q562F6 1265 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 C2CD4AQ8NCU7 369 aaPredicted RBP8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 FAM83CQ9BQN1 747 aa8.42□□□□□ -1.06
SMARCC1-207ENST00000485833 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
SMARCC1-207ENST00000485833 Q8N3U1 123 aa8.41□□□□□ -1.06
SMARCC1-207ENST00000485833 C12orf49Q9H741 205 aa8.41□□□□□ -1.06
SMARCC1-207ENST00000485833 RAD18Q9NS91 495 aa8.41□□□□□ -1.06
SMARCC1-207ENST00000485833 SCO2A0A1W2PP80 73 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 GSTP1P09211 210 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 NFIAQ12857 509 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 AKAP4Q5JQC9 854 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 WDR18Q9BV38 432 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 PPM1HQ9ULR3 514 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 RNF112Q9ULX5 631 aa8.4□□□□□ -1.06
SMARCC1-207ENST00000485833 AOC2O75106 756 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 PRPF40AO75400 957 aaKnown RBP8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 RXRBP28702 533 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 USP11P51784 963 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 FRMD6Q96NE9 622 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 DBNDD2Q9BQY9 259 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 AP4E1Q9UPM8 1137 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 ACTL7BQ9Y614 415 aa8.39□□□□□ -1.07
SMARCC1-207ENST00000485833 SYNGAP1Q96PV0 1343 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 FGD1P98174 961 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 HNRNPUQ00839 825 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 YIPF2Q9BWQ6 316 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 KRT82Q9NSB4 513 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 FAM8A1Q9UBU6 413 aa8.38□□□□□ -1.07
SMARCC1-207ENST00000485833 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
SMARCC1-207ENST00000485833 LIG1P18858 919 aa8.37□□□□□ -1.07
SMARCC1-207ENST00000485833 NME2P22392 152 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms