RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SSC5DA1L4H1 1573 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 UBE2Q2LH0YL09 131 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 ZNF157P51786 506 aaPredicted RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 ATP8B2P98198 1209 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 OS9Q13438 667 aaPredicted RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 POLA2Q14181 598 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 DEFB129Q9H1M3 183 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
MSH5-216ENST00000484309 COG6Q9Y2V7 657 aa15.2■□□□□ 0.02
MSH5-216ENST00000484309 NF2P35240 595 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 SSH3Q8TE77 659 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
MSH5-216ENST00000484309 CASP8AP2Q9UKL3 1982 aa15.18■□□□□ 0.02
MSH5-216ENST00000484309 FAM155AB1AL88 458 aaPredicted RBP15.18■□□□□ 0.02
MSH5-216ENST00000484309 TCP10L2B9ZVM9 353 aa15.18■□□□□ 0.02
MSH5-216ENST00000484309 SURF6O75683 361 aaKnown RBP15.18■□□□□ 0.02
MSH5-216ENST00000484309 PRDX5P30044 214 aa15.18■□□□□ 0.02
MSH5-216ENST00000484309 CACNB3P54284 484 aa15.18■□□□□ 0.02
MSH5-216ENST00000484309 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
MSH5-216ENST00000484309 MVPQ14764 893 aaKnown RBP15.18■□□□□ 0.02
MSH5-216ENST00000484309 TSKSQ9UJT2 592 aa15.18■□□□□ 0.02
MSH5-216ENST00000484309 MS4A1P11836 297 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 MAP2K2P36507 400 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 FKBP1BP68106 108 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 RASA3Q14644 834 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
MSH5-216ENST00000484309 MAST3O60307 1309 aa15.17■□□□□ 0.02
MSH5-216ENST00000484309 SLC10A3P09131 477 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 LBX1P52954 281 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 HDLBPQ00341 1268 aaKnown RBP15.16■□□□□ 0.02
MSH5-216ENST00000484309 NOGQ13253 232 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 NBPF12Q5TAG4 269 aaPredicted RBP15.16■□□□□ 0.02
MSH5-216ENST00000484309 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 BEGAINQ9BUH8 593 aa15.16■□□□□ 0.02
MSH5-216ENST00000484309 SEMA3EO15041 775 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
MSH5-216ENST00000484309 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
MSH5-216ENST00000484309 CTCFP49711 727 aaPredicted RBP15.15■□□□□ 0.02
MSH5-216ENST00000484309 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
MSH5-216ENST00000484309 MKRN3Q13064 507 aaKnown RBP15.15■□□□□ 0.02
MSH5-216ENST00000484309 CCDC102AQ96A19 550 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 TMEM39BQ9GZU3 492 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 SUGT1Q9Y2Z0 365 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 PPP2R3BQ9Y5P8 575 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 MAST2Q6P0Q8 1798 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 DOCK2Q92608 1830 aa15.15■□□□□ 0.02
MSH5-216ENST00000484309 TNFAIP1Q13829 316 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
MSH5-216ENST00000484309 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 DBNDD2Q9BQY9 259 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 DAGLAQ9Y4D2 1042 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 SALL1Q9NSC2 1324 aa15.14■□□□□ 0.01
MSH5-216ENST00000484309 TNNI2P48788 182 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 CDK5RAP2Q96SN8 1893 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 TMOD2Q9NZR1 351 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
MSH5-216ENST00000484309 LAMB1P07942 1786 aa15.13■□□□□ 0.01
MSH5-216ENST00000484309 SUPT20HL1Q3ZLR7 823 aa15.12■□□□□ 0.01
MSH5-216ENST00000484309 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
MSH5-216ENST00000484309 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
MSH5-216ENST00000484309 CLMNQ96JQ2 1002 aa15.12■□□□□ 0.01
MSH5-216ENST00000484309 TEPSINQ96N21 525 aa15.12■□□□□ 0.01
MSH5-216ENST00000484309 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
MSH5-216ENST00000484309 APBB1O00213 710 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 PPP1R12BO60237 982 aaPredicted RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 ARID4AP29374 1257 aaPredicted RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 MCAMP43121 646 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 TTC39AQ5SRH9 613 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 SPATA5Q8NB90 893 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 MRIQ9BWK5 157 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 CCDC8Q9H0W5 538 aaPredicted RBP15.11■□□□□ 0.01
MSH5-216ENST00000484309 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
MSH5-216ENST00000484309 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms