RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 HDAC9Q9UKV0 1011 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 ABT1Q9ULW3 272 aaKnown RBP18.61■□□□□ 0.57
COL16A1-211ENST00000479100 PSME4Q14997 1843 aa18.6■□□□□ 0.57
COL16A1-211ENST00000479100 COL1A1P02452 1464 aaPredicted RBP18.6■□□□□ 0.57
COL16A1-211ENST00000479100 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
COL16A1-211ENST00000479100 TLL2Q9Y6L7 1015 aa18.6■□□□□ 0.57
COL16A1-211ENST00000479100 EGFRP00533 1210 aa18.59■□□□□ 0.57
COL16A1-211ENST00000479100 MCAMP43121 646 aa18.59■□□□□ 0.57
COL16A1-211ENST00000479100 GRIK5Q16478 980 aa18.59■□□□□ 0.57
COL16A1-211ENST00000479100 ABCF2Q9UG63 623 aa18.59■□□□□ 0.57
COL16A1-211ENST00000479100 TTF2Q9UNY4 1162 aaKnown RBP18.59■□□□□ 0.57
COL16A1-211ENST00000479100 ZNF280AP59817 542 aaPredicted RBP18.58■□□□□ 0.56
COL16A1-211ENST00000479100 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.56
COL16A1-211ENST00000479100 SMC5Q8IY18 1101 aa18.58■□□□□ 0.56
COL16A1-211ENST00000479100 MYOZ2Q9NPC6 264 aa18.58■□□□□ 0.56
COL16A1-211ENST00000479100 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
COL16A1-211ENST00000479100 RBM5P52756 815 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL16A1-211ENST00000479100 TBC1D9Q6ZT07 1266 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 SAPCD2Q86UD0 394 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
COL16A1-211ENST00000479100 GPATCH3Q96I76 525 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 ZNF512BQ96KM6 892 aaPredicted RBP18.57■□□□□ 0.56
COL16A1-211ENST00000479100 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 MYH13Q9UKX3 1938 aa18.57■□□□□ 0.56
COL16A1-211ENST00000479100 ZNF646O15015 1829 aaPredicted RBP18.56■□□□□ 0.56
COL16A1-211ENST00000479100 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
COL16A1-211ENST00000479100 CELF2O95319 508 aaKnown RBP18.56■□□□□ 0.56
COL16A1-211ENST00000479100 ZAP70P43403 619 aa18.56■□□□□ 0.56
COL16A1-211ENST00000479100 CAPNS2Q96L46 248 aa18.56■□□□□ 0.56
COL16A1-211ENST00000479100 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
COL16A1-211ENST00000479100 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
COL16A1-211ENST00000479100 SALL1Q9NSC2 1324 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 ZBTB22O15209 634 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 PRDX5P30044 214 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 CTCFP49711 727 aaPredicted RBP18.55■□□□□ 0.56
COL16A1-211ENST00000479100 DLGAP5Q15398 846 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 CFAP100Q494V2 611 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 SPTY2D1Q68D10 685 aaPredicted RBP18.55■□□□□ 0.56
COL16A1-211ENST00000479100 CYP4F22Q6NT55 531 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
COL16A1-211ENST00000479100 BOLA2Q9H3K6 86 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 SUGT1Q9Y2Z0 365 aa18.55■□□□□ 0.56
COL16A1-211ENST00000479100 ECE1P42892 770 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 MMP14P50281 582 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 MAP2K1Q02750 393 aaPredicted RBP18.54■□□□□ 0.56
COL16A1-211ENST00000479100 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 DLK2Q6UY11 383 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 ERICH6Q7L0X2 663 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 CHD1LQ86WJ1 897 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 DZIP1Q86YF9 867 aaKnown RBP18.54■□□□□ 0.56
COL16A1-211ENST00000479100 AIDAQ96BJ3 306 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
COL16A1-211ENST00000479100 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 RAI14Q9P0K7 980 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
COL16A1-211ENST00000479100 MAST3O60307 1309 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 CYP2E1P05181 493 aaPredicted RBP18.53■□□□□ 0.56
COL16A1-211ENST00000479100 ATP5JP18859 108 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 CRKP46108 304 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 NUCB1Q02818 461 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 PCDHAC2Q9Y5I4 1007 aa18.53■□□□□ 0.56
COL16A1-211ENST00000479100 HSPA8P11142 646 aaKnown RBP18.52■□□□□ 0.56
COL16A1-211ENST00000479100 DIXDC1Q155Q3 683 aa18.52■□□□□ 0.56
COL16A1-211ENST00000479100 NBPF9Q3BBW0 867 aa18.52■□□□□ 0.56
COL16A1-211ENST00000479100 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
COL16A1-211ENST00000479100 CCDC136Q96JN2 1154 aa18.52■□□□□ 0.56
COL16A1-211ENST00000479100 PIH1D3Q9NQM4 214 aaKnown RBP18.52■□□□□ 0.56
COL16A1-211ENST00000479100 SERPINA10Q9UK55 444 aa18.52■□□□□ 0.56
COL16A1-211ENST00000479100 ASTN2O75129 1339 aaPredicted RBP18.51■□□□□ 0.55
COL16A1-211ENST00000479100 GOLIM4O00461 696 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 WNT10BO00744 389 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 MX1P20591 662 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 MAP2K2P36507 400 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 LBX1P52954 281 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL16A1-211ENST00000479100 ANTXR1Q9H6X2 564 aa18.51■□□□□ 0.55
COL16A1-211ENST00000479100 IDH1O75874 414 aaKnown RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 HDLBPQ00341 1268 aaKnown RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 MECOMQ03112 1051 aa18.5■□□□□ 0.55
COL16A1-211ENST00000479100 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 PAXIP1Q6ZW49 1069 aaPredicted RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 PRMT6Q96LA8 375 aaPredicted RBP18.5■□□□□ 0.55
COL16A1-211ENST00000479100 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
COL16A1-211ENST00000479100 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 THSD7BQ9C0I4 1608 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 ERC2O15083 957 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 MYO1BO43795 1136 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 AOC2O75106 756 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 SLF2Q8IX21 1173 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 MTMR14Q8NCE2 650 aa18.49■□□□□ 0.55
COL16A1-211ENST00000479100 EDC3Q96F86 508 aaKnown RBP18.49■□□□□ 0.55
COL16A1-211ENST00000479100 HAUS7Q99871 368 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms