RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
LSM2-212ENST00000477182 ZBED3Q96IU2 234 aaPredicted RBP14.45□□□□□ -0.1
LSM2-212ENST00000477182 GJA5P36382 358 aa14.44□□□□□ -0.1
LSM2-212ENST00000477182 DLGAP5Q15398 846 aa14.44□□□□□ -0.1
LSM2-212ENST00000477182 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
LSM2-212ENST00000477182 KIAA0825Q8IV33 1275 aa14.44□□□□□ -0.1
LSM2-212ENST00000477182 CWC25Q9NXE8 425 aaPredicted RBP14.44□□□□□ -0.1
LSM2-212ENST00000477182 SSC5DA1L4H1 1573 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 ECM29Q5VYK3 1845 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 MYO1BO43795 1136 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 PDE8AO60658 829 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 GPR153Q6NV75 609 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 CCDC191Q8NCU4 936 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 EXOC6Q8TAG9 804 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 CDC5LQ99459 802 aaKnown RBP14.43□□□□□ -0.1
LSM2-212ENST00000477182 MYH3P11055 1940 aa14.43□□□□□ -0.1
LSM2-212ENST00000477182 ZNF804BA4D1E1 1349 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 GCKRQ14397 625 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 MTMR14Q8NCE2 650 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 OPTNQ96CV9 577 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 SHISA4Q96DD7 197 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 MEIS3Q99687 375 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
LSM2-212ENST00000477182 GRM8O00222 908 aa14.41□□□□□ -0.1
LSM2-212ENST00000477182 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
LSM2-212ENST00000477182 USP2O75604 605 aaPredicted RBP14.41□□□□□ -0.1
LSM2-212ENST00000477182 GTF2A2P52657 109 aa14.41□□□□□ -0.1
LSM2-212ENST00000477182 JARID2Q92833 1246 aaPredicted RBP14.41□□□□□ -0.1
LSM2-212ENST00000477182 MS4A4AQ96JQ5 239 aa14.41□□□□□ -0.1
LSM2-212ENST00000477182 USP44Q9H0E7 712 aa14.41□□□□□ -0.1
LSM2-212ENST00000477182 C9orf78Q9NZ63 289 aaPredicted RBP14.41□□□□□ -0.1
LSM2-212ENST00000477182 SOX1O00570 391 aaPredicted RBP14.4□□□□□ -0.1
LSM2-212ENST00000477182 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
LSM2-212ENST00000477182 GJA8P48165 433 aa14.4□□□□□ -0.1
LSM2-212ENST00000477182 LACTBP83111 547 aaPredicted RBP14.4□□□□□ -0.1
LSM2-212ENST00000477182 UBE2Q1Q7Z7E8 422 aa14.4□□□□□ -0.1
LSM2-212ENST00000477182 LRCH3Q96II8 777 aa14.4□□□□□ -0.1
LSM2-212ENST00000477182 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
LSM2-212ENST00000477182 LEMD3Q9Y2U8 911 aa14.4□□□□□ -0.1
LSM2-212ENST00000477182 LAMA3Q16787 3333 aa14.4□□□□□ -0.1
LSM2-212ENST00000477182 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 TLR2O60603 784 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 GJB1P08034 283 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 GNAI3P08754 354 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 NBPF7P0C2Y1 421 aaPredicted RBP14.39□□□□□ -0.11
LSM2-212ENST00000477182 CCL15Q16663 113 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 NBPF12Q5TAG4 269 aaPredicted RBP14.39□□□□□ -0.11
LSM2-212ENST00000477182 UBE3BQ7Z3V4 1068 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 BRI3BPQ8WY22 251 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
LSM2-212ENST00000477182 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
LSM2-212ENST00000477182 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 STXBP5LQ9Y2K9 1186 aa14.39□□□□□ -0.11
LSM2-212ENST00000477182 H7C1W4 665 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 UBTFL1P0CB47 393 aaPredicted RBP14.38□□□□□ -0.11
LSM2-212ENST00000477182 HOXD10P28358 340 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 GTF2IP78347 998 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 MTFR1Q15390 333 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 HELBQ8NG08 1087 aaPredicted RBP14.38□□□□□ -0.11
LSM2-212ENST00000477182 CHMP4BQ9H444 224 aaKnown RBP14.38□□□□□ -0.11
LSM2-212ENST00000477182 C1orf115Q9H7X2 142 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 OTOFQ9HC10 1997 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 UTYO14607 1347 aa14.38□□□□□ -0.11
LSM2-212ENST00000477182 EVI5O60447 810 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 CAPN2P17655 700 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 CASP7P55210 303 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 FAM43AQ8N2R8 423 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 COL25A1Q9BXS0 654 aaPredicted RBP14.37□□□□□ -0.11
LSM2-212ENST00000477182 ARHGAP39Q9C0H5 1083 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 VEZTQ9HBM0 779 aa14.37□□□□□ -0.11
LSM2-212ENST00000477182 UNC80Q8N2C7 3258 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 FARP2O94887 1054 aaPredicted RBP14.36□□□□□ -0.11
LSM2-212ENST00000477182 GRK4P32298 578 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 UBXN2AP68543 259 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 TNFAIP1Q13829 316 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 RASA3Q14644 834 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 TXNRD3Q86VQ6 643 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 RAET1EQ8TD07 263 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 SUCLG2Q96I99 432 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 LRRFIP2Q9Y608 721 aaKnown RBP14.36□□□□□ -0.11
LSM2-212ENST00000477182 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
LSM2-212ENST00000477182 CLRN2A0PK11 232 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 GNAI2P04899 355 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 CCL5P13501 91 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 CTSWP56202 376 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 TRIM47Q96LD4 638 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 CSADQ9Y600 493 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 ZSWIM8A7E2V4 1837 aa14.35□□□□□ -0.11
LSM2-212ENST00000477182 CETPP11597 493 aa14.34□□□□□ -0.11
LSM2-212ENST00000477182 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
LSM2-212ENST00000477182 KAZALD1Q96I82 304 aa14.34□□□□□ -0.11
LSM2-212ENST00000477182 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms