RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 FAXDC2Q96IV6 333 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
ABCF1-205ENST00000475993 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
ABCF1-205ENST00000475993 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 TOP1P11387 765 aaKnown RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 PAX7P23759 505 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 KRT32Q14532 448 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 NSUN7Q8NE18 718 aaKnown RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 C3P01024 1663 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 BIN1O00499 593 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 STX10O60499 249 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 CASP8Q14790 479 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-205ENST00000475993 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 SUGCTQ9HAC7 445 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 RTEL1Q9NZ71 1219 aa12.1□□□□□ -0.47
ABCF1-205ENST00000475993 TUBB4BP68371 445 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 SETQ01105 290 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-205ENST00000475993 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-205ENST00000475993 HSP90B2PQ58FF3 399 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 Q6ZUG5 572 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 PFKFB2O60825 505 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 CCDC12Q8WUD4 166 aaPredicted RBP12.09□□□□□ -0.47
ABCF1-205ENST00000475993 KAT2BQ92831 832 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 TMEM131LA2VDJ0 1609 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 SPATA31D1Q6ZQQ2 1576 aa12.09□□□□□ -0.47
ABCF1-205ENST00000475993 TMEM232C9JQI7 657 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 ALDH1L1O75891 902 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 CTDNEP1O95476 244 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 SERPINC1P01008 464 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 MTX1Q13505 466 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 SKIDA1Q1XH10 827 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.47
ABCF1-205ENST00000475993 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 LRRC37A3O60309 1634 aa12.08□□□□□ -0.47
ABCF1-205ENST00000475993 MYO1BO43795 1136 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 ZNF589Q86UQ0 364 aaPredicted RBP12.08□□□□□ -0.48
ABCF1-205ENST00000475993 LINC00301Q8NCQ3 95 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 CDC23Q9UJX2 597 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
ABCF1-205ENST00000475993 MYL5Q02045 173 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 SIL1Q9H173 461 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
ABCF1-205ENST00000475993 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 TAF5LO75529 589 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 ERLIN2O94905 339 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 HNRNPH1P31943 449 aaKnown RBP12.07□□□□□ -0.48
ABCF1-205ENST00000475993 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
ABCF1-205ENST00000475993 RPS6KL1Q9Y6S9 549 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 PHACTR2O75167 634 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 ZNF202O95125 648 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 IPO7O95373 1038 aaKnown RBP12.07□□□□□ -0.48
ABCF1-205ENST00000475993 FOSBP53539 338 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 VSNL1P62760 191 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 ACBD3Q9H3P7 528 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
ABCF1-205ENST00000475993 PEAK1Q9H792 1746 aa12.07□□□□□ -0.48
ABCF1-205ENST00000475993 MAP3K19Q56UN5 1328 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 EXOC5O00471 708 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 PRPF6O94906 941 aaKnown RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.484e-6■■■□□ 17.5
ABCF1-205ENST00000475993 HSP90AB2PQ58FF8 381 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 LRRIQ3A6PVS8 624 aaPredicted RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 TUBBP07437 444 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 BEND3Q5T5X7 828 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 KCNV1Q6PIU1 500 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 AACSQ86V21 672 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
ABCF1-205ENST00000475993 AKAP12Q02952 1782 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 NEO1Q92859 1461 aa12.06□□□□□ -0.48
ABCF1-205ENST00000475993 AGLP35573 1532 aa12.05□□□□□ -0.48
ABCF1-205ENST00000475993 WASLO00401 505 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms