RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 BEND4Q6ZU67 534 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
LTN1-204ENST00000475344 CORO1BQ9BR76 489 aa8.65□□□□□ -1.02
LTN1-204ENST00000475344 TREHO43280 583 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 ECEL1O95672 775 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 ITPKAP23677 461 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 ZFP64Q9NPA5 681 aa8.64□□□□□ -1.03
LTN1-204ENST00000475344 GSC2O15499 205 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
LTN1-204ENST00000475344 B3GALT4O96024 378 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 CTSBP07858 339 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 NFIAQ12857 509 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
LTN1-204ENST00000475344 ZSCAN29Q8IWY8 852 aaPredicted RBP8.63□□□□□ -1.03
LTN1-204ENST00000475344 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
LTN1-204ENST00000475344 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 RNF112Q9ULX5 631 aa8.63□□□□□ -1.03
LTN1-204ENST00000475344 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
LTN1-204ENST00000475344 USP11P51784 963 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 DSC3Q14574 896 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
LTN1-204ENST00000475344 AKAP4Q5JQC9 854 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 CLEC10AQ8IUN9 316 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 GLIS3Q8NEA6 775 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 TRIM56Q9BRZ2 755 aaKnown RBP8.62□□□□□ -1.03
LTN1-204ENST00000475344 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 NRSN2Q9GZP1 204 aa8.62□□□□□ -1.03
LTN1-204ENST00000475344 GPN3Q9UHW5 284 aaPredicted RBP8.62□□□□□ -1.03
LTN1-204ENST00000475344 SSTR4P31391 388 aa8.61□□□□□ -1.03
LTN1-204ENST00000475344 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
LTN1-204ENST00000475344 LRP8Q14114 963 aa8.61□□□□□ -1.03
LTN1-204ENST00000475344 ENOX2Q16206 610 aaKnown RBP8.61□□□□□ -1.03
LTN1-204ENST00000475344 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
LTN1-204ENST00000475344 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
LTN1-204ENST00000475344 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
LTN1-204ENST00000475344 HIF3AQ9Y2N7 669 aa8.61□□□□□ -1.03
LTN1-204ENST00000475344 TIAF1O95411 115 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 TGFB1P01137 390 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 SOX4Q06945 474 aaPredicted RBP8.6□□□□□ -1.03
LTN1-204ENST00000475344 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 HP1BP3Q5SSJ5 553 aaPredicted RBP8.6□□□□□ -1.03
LTN1-204ENST00000475344 RNF43Q68DV7 783 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 NXPE4Q6UWF7 544 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 NBPF11Q86T75 865 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 FBLIM1Q8WUP2 373 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 AP4E1Q9UPM8 1137 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 AKAP2Q9Y2D5 859 aa8.6□□□□□ -1.03
LTN1-204ENST00000475344 HYAL3O43820 417 aaPredicted RBP8.59□□□□□ -1.03
LTN1-204ENST00000475344 ADH5P11766 374 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 NFKBIBQ15653 356 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 MFSD14AQ96MC6 490 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
LTN1-204ENST00000475344 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
LTN1-204ENST00000475344 RAB6AP20340 208 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 AP3B2Q13367 1082 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 RPS26P11Q5JNZ5 115 aaPredicted RBP8.58□□□□□ -1.04
LTN1-204ENST00000475344 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 DYMQ7RTS9 669 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 FBXL6Q8N531 539 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 C2CD4AQ8NCU7 369 aaPredicted RBP8.58□□□□□ -1.04
LTN1-204ENST00000475344 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 PCMTD2Q9NV79 361 aa8.58□□□□□ -1.04
LTN1-204ENST00000475344 FAM95CA0A1B0GW59 222 aa8.57□□□□□ -1.04
LTN1-204ENST00000475344 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
LTN1-204ENST00000475344 SHKBP1Q8TBC3 707 aa8.57□□□□□ -1.04
LTN1-204ENST00000475344 WWC3Q9ULE0 1092 aa8.57□□□□□ -1.04
LTN1-204ENST00000475344 ACTL7BQ9Y614 415 aa8.57□□□□□ -1.04
LTN1-204ENST00000475344 WDR64B1ANS9 1081 aa8.56□□□□□ -1.04
LTN1-204ENST00000475344 LIG1P18858 919 aa8.56□□□□□ -1.04
LTN1-204ENST00000475344 ATP2B2Q01814 1243 aa8.56□□□□□ -1.04
LTN1-204ENST00000475344 PPP2R3AQ06190 1150 aa8.56□□□□□ -1.04
LTN1-204ENST00000475344 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
LTN1-204ENST00000475344 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
LTN1-204ENST00000475344 AOC2O75106 756 aa8.55□□□□□ -1.04
LTN1-204ENST00000475344 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
LTN1-204ENST00000475344 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
LTN1-204ENST00000475344 TMEM39AQ9NV64 488 aa8.55□□□□□ -1.04
LTN1-204ENST00000475344 XRCC5P13010 732 aaKnown RBP8.54□□□□□ -1.04
LTN1-204ENST00000475344 KCNB2Q92953 911 aa8.54□□□□□ -1.04
LTN1-204ENST00000475344 WDR18Q9BV38 432 aa8.54□□□□□ -1.04
LTN1-204ENST00000475344 COBLO75128 1261 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 ASPAP45381 313 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 ALG1LQ6GMV1 187 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
LTN1-204ENST00000475344 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 CCDC86Q9H6F5 360 aaKnown RBP8.53□□□□□ -1.04
LTN1-204ENST00000475344 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms