RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 PLEKHM2Q8IWE5 1019 aa16.19■□□□□ 0.18
BRAT1-205ENST00000473879 MTMR14Q8NCE2 650 aa16.19■□□□□ 0.18
BRAT1-205ENST00000473879 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
BRAT1-205ENST00000473879 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
BRAT1-205ENST00000473879 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
BRAT1-205ENST00000473879 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
BRAT1-205ENST00000473879 BCAMP50895 628 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 TNNI3KQ59H18 835 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 DLK2Q6UY11 383 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 SAPCD2Q86UD0 394 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 OSBPL3Q9H4L5 887 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 FPGT-TNNI3KV9GXZ4 949 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 THSD7BQ9C0I4 1608 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
BRAT1-205ENST00000473879 PDE1AP54750 535 aa16.17■□□□□ 0.18
BRAT1-205ENST00000473879 DLGAP5Q15398 846 aa16.17■□□□□ 0.18
BRAT1-205ENST00000473879 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
BRAT1-205ENST00000473879 AKAP11Q9UKA4 1901 aa16.17■□□□□ 0.18
BRAT1-205ENST00000473879 PDS5AQ29RF7 1337 aaKnown RBP16.17■□□□□ 0.18
BRAT1-205ENST00000473879 F8W031 263 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 ECE1P42892 770 aa16.16■□□□□ 0.18
BRAT1-205ENST00000473879 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
BRAT1-205ENST00000473879 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 TBC1D22AQ8WUA7 517 aa16.16■□□□□ 0.18
BRAT1-205ENST00000473879 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 CDCA5Q96FF9 252 aa16.16■□□□□ 0.18
BRAT1-205ENST00000473879 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 WDR33Q9C0J8 1336 aaKnown RBP16.16■□□□□ 0.18
BRAT1-205ENST00000473879 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 ERC2O15083 957 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
BRAT1-205ENST00000473879 GBA2Q9HCG7 927 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-205ENST00000473879 ADORA1P30542 326 aa16.14■□□□□ 0.17
BRAT1-205ENST00000473879 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-205ENST00000473879 APOBEC3FQ8IUX4 373 aaKnown RBP16.14■□□□□ 0.17
BRAT1-205ENST00000473879 CAPNS2Q96L46 248 aa16.14■□□□□ 0.17
BRAT1-205ENST00000473879 CCDC8Q9H0W5 538 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-205ENST00000473879 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
BRAT1-205ENST00000473879 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
BRAT1-205ENST00000473879 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
BRAT1-205ENST00000473879 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 SEMA3EO15041 775 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 MYO1BO43795 1136 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 HSPA1AP0DMV8 641 aaKnown RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 HSPA1BP0DMV9 641 aaKnown RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 CYP4F22Q6NT55 531 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
BRAT1-205ENST00000473879 SUGT1Q9Y2Z0 365 aa16.13■□□□□ 0.17
BRAT1-205ENST00000473879 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-205ENST00000473879 PHKA1P46020 1223 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 HUNKP57058 714 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 TIMM10P62072 90 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 FKBP1BP68106 108 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 HDLBPQ00341 1268 aaKnown RBP16.12■□□□□ 0.17
BRAT1-205ENST00000473879 CCDC102BQ68D86 513 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 ZNF512BQ96KM6 892 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-205ENST00000473879 MRIQ9BWK5 157 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
BRAT1-205ENST00000473879 SCAF8Q9UPN6 1271 aaKnown RBP16.12■□□□□ 0.17
BRAT1-205ENST00000473879 PCDHAC2Q9Y5I4 1007 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 SALL1Q9NSC2 1324 aa16.12■□□□□ 0.17
BRAT1-205ENST00000473879 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
BRAT1-205ENST00000473879 GRIK5Q16478 980 aa16.11■□□□□ 0.17
BRAT1-205ENST00000473879 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
BRAT1-205ENST00000473879 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
BRAT1-205ENST00000473879 DBNDD2Q9BQY9 259 aa16.11■□□□□ 0.17
BRAT1-205ENST00000473879 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
BRAT1-205ENST00000473879 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
BRAT1-205ENST00000473879 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
BRAT1-205ENST00000473879 MAP2K2P36507 400 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 CRKP46108 304 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 CCDC158Q5M9N0 1113 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 WBP1LQ9NX94 342 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 DENND2AQ9ULE3 1009 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 MAST3O60307 1309 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
BRAT1-205ENST00000473879 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 ATP5JP18859 108 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 NF2P35240 595 aa16.09■□□□□ 0.17
BRAT1-205ENST00000473879 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-205ENST00000473879 GRM1Q13255 1194 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms