RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 A0A1W2PPZ6 126 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 ARID5AQ03989 594 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 RASSF4Q9H2L5 321 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 SLC6A14Q9UN76 642 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
CKS1B-204ENST00000471245 ATP11AP98196 1134 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 MLLT1Q03111 559 aaPredicted RBP8.59□□□□□ -1.03
CKS1B-204ENST00000471245 C20orf204Q6ZNR8 217 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 RELL1Q8IUW5 271 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 GPRASP2Q96D09 838 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 TMEM74Q96NL1 305 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 PPP1R1BQ9UD71 204 aaPredicted RBP8.59□□□□□ -1.03
CKS1B-204ENST00000471245 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
CKS1B-204ENST00000471245 PRG4Q92954 1404 aaPredicted RBP8.59□□□□□ -1.03
CKS1B-204ENST00000471245 FHAD1B1AJZ9 1412 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 METTL12A8MUP2 240 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 J3QW42 95 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 PIK3R2O00459 728 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 TRPA1O75762 1119 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
CKS1B-204ENST00000471245 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-204ENST00000471245 EIF2AK2P19525 551 aaKnown RBP8.58□□□□□ -1.04
CKS1B-204ENST00000471245 ATP2B1P20020 1258 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 DNAJA1P31689 397 aaKnown RBP8.58□□□□□ -1.04
CKS1B-204ENST00000471245 PAK2Q13177 524 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 SPRED3Q2MJR0 410 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 RHOVQ96L33 236 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 NECAB3Q96P71 396 aaPredicted RBP8.58□□□□□ -1.04
CKS1B-204ENST00000471245 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 RUSC2Q8N2Y8 1516 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
CKS1B-204ENST00000471245 FBXO24O75426 580 aa8.57□□□□□ -1.04
CKS1B-204ENST00000471245 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
CKS1B-204ENST00000471245 KIAA0825Q8IV33 1275 aa8.57□□□□□ -1.04
CKS1B-204ENST00000471245 BEND7Q8N7W2 519 aaPredicted RBP8.57□□□□□ -1.04
CKS1B-204ENST00000471245 TRIM56Q9BRZ2 755 aaKnown RBP8.57□□□□□ -1.04
CKS1B-204ENST00000471245 SPON2Q9BUD6 331 aa8.57□□□□□ -1.04
CKS1B-204ENST00000471245 IGFLR1Q9H665 355 aa8.57□□□□□ -1.04
CKS1B-204ENST00000471245 ERICH3Q5RHP9 1530 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 ENC1O14682 589 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 CELA3AP09093 270 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 AMPD1P23109 780 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 GBP2P32456 591 aaPredicted RBP8.56□□□□□ -1.04
CKS1B-204ENST00000471245 DGKGP49619 791 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 LIG3P49916 1009 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 RPS26P62854 115 aaKnown RBP8.56□□□□□ -1.04
CKS1B-204ENST00000471245 FAM35AQ86V20 835 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 PHC3Q8NDX5 983 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 BSNDQ8WZ55 320 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
CKS1B-204ENST00000471245 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
CKS1B-204ENST00000471245 SEC31BQ9NQW1 1179 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 ADAMTS1Q9UHI8 967 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
CKS1B-204ENST00000471245 FGRP09769 529 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 ATF4P18848 351 aaPredicted RBP8.55□□□□□ -1.04
CKS1B-204ENST00000471245 EIF4A3P38919 411 aaKnown RBP8.55□□□□□ -1.04
CKS1B-204ENST00000471245 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 FAAP100Q0VG06 881 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 CEP135Q66GS9 1140 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 CACTIN-AS1Q8N1I8 211 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
CKS1B-204ENST00000471245 CLEC4MQ9H2X3 399 aaPredicted RBP8.55□□□□□ -1.04
CKS1B-204ENST00000471245 PPRC1Q5VV67 1664 aaKnown RBP8.55□□□□□ -1.04
CKS1B-204ENST00000471245 TOP2BQ02880 1626 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 PTPRAP18433 802 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 LINC00114Q6XXX2 140 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 MUC3BQ9H195 1237 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 NAGPAQ9UK23 515 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 SOX13Q9UN79 622 aa8.54□□□□□ -1.04
CKS1B-204ENST00000471245 WRNQ14191 1432 aaPredicted RBP eCLIP8.54□□□□□ -1.04
CKS1B-204ENST00000471245 LILRB5O75023 590 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-204ENST00000471245 B3GALT4O96024 378 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 CPB1P15086 417 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 LMNB2Q03252 620 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 PPP2R3AQ06190 1150 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 MAP3K11Q16584 847 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 PERM1Q5SV97 790 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 TTBK2Q6IQ55 1244 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 PSAPL1Q6NUJ1 521 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 ELMSAN1Q6PJG2 1045 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 AGMOQ6ZNB7 445 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 SEC16BQ96JE7 1060 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 LPIN3Q9BQK8 851 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 NT5C1AQ9BXI3 368 aa8.53□□□□□ -1.04
CKS1B-204ENST00000471245 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms