RNA–Protein interactions for RNA: ENST00000470443.5

PABPC4-210, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-210ENST00000470443 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 FAM177BA6PVY3 158 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 FZD9O00144 591 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 TRAF5O00463 557 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 AOC2O75106 756 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 BMP2P12643 396 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 RGS19P49795 217 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
PABPC4-210ENST00000470443 SYNE4Q8N205 404 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
PABPC4-210ENST00000470443 MAGEB6P1A0A0J9YX57 407 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 EPS15P42566 896 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 GRM1Q13255 1194 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 HLFQ16534 295 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 CCDC93Q567U6 631 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
PABPC4-210ENST00000470443 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 PHACTR3Q96KR7 559 aa8.3□□□□□ -1.08
PABPC4-210ENST00000470443 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
PABPC4-210ENST00000470443 NPR1P16066 1061 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
PABPC4-210ENST00000470443 ST5P78524 1137 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 CAPNS2Q96L46 248 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
PABPC4-210ENST00000470443 ABT1Q9ULW3 272 aaKnown RBP8.29□□□□□ -1.08
PABPC4-210ENST00000470443 GJA3Q9Y6H8 435 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
PABPC4-210ENST00000470443 COL3A1P02461 1466 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 NPHP1O15259 732 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 DIAPH1O60610 1272 aaKnown RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 SCNN1DP51172 638 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 MLLT1Q03111 559 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 TEFQ10587 303 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 DLK2Q6UY11 383 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 NBPF5PQ86XG9 351 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 GPR101Q96P66 508 aaPredicted RBP8.28□□□□□ -1.08
PABPC4-210ENST00000470443 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 ZIC5Q96T25 663 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 PODXL2Q9NZ53 605 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 KNSTRNQ9Y448 316 aa8.28□□□□□ -1.08
PABPC4-210ENST00000470443 CEMIPQ8WUJ3 1361 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 BTBD11A6QL63 1104 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 CNGB1Q14028 1251 aaPredicted RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 PNMA8AQ86V59 439 aaPredicted RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 GPC2Q8N158 579 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 TEX13AQ9BXU3 409 aaPredicted RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 MCOLN1Q9GZU1 580 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
PABPC4-210ENST00000470443 CDV3Q9UKY7 258 aaKnown RBP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
PABPC4-210ENST00000470443 TCERG1O14776 1098 aaKnown RBP8.26□□□□□ -1.09
PABPC4-210ENST00000470443 U2SURPO15042 1029 aaKnown RBP8.26□□□□□ -1.09
PABPC4-210ENST00000470443 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 SH3D19Q5HYK7 790 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
PABPC4-210ENST00000470443 SHTN1A0MZ66 631 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
PABPC4-210ENST00000470443 CRY2Q49AN0 593 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 PPP1R26Q5T8A7 1209 aaPredicted RBP8.25□□□□□ -1.09
PABPC4-210ENST00000470443 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 TPTE2Q6XPS3 522 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 MCM10Q7L590 875 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 RTKN2Q8IZC4 609 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 SLC10A4Q96EP9 437 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 PSMD1Q99460 953 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
PABPC4-210ENST00000470443 MIS18AQ9NYP9 233 aa8.25□□□□□ -1.09
PABPC4-210ENST00000470443 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.24□□□□□ -1.094e-10■■□□□ 11.5
PABPC4-210ENST00000470443 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
PABPC4-210ENST00000470443 Q6ZVU0 165 aa8.24□□□□□ -1.09
PABPC4-210ENST00000470443 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
PABPC4-210ENST00000470443 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
PABPC4-210ENST00000470443 GLIS2Q9BZE0 524 aaPredicted RBP8.24□□□□□ -1.09
PABPC4-210ENST00000470443 KIF7Q2M1P5 1343 aa8.24□□□□□ -1.09
PABPC4-210ENST00000470443 TRPM7Q96QT4 1865 aa8.23□□□□□ -1.09
PABPC4-210ENST00000470443 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
PABPC4-210ENST00000470443 ALDH1B1P30837 517 aa8.23□□□□□ -1.09
PABPC4-210ENST00000470443 PRKAR2BP31323 418 aa8.23□□□□□ -1.09
PABPC4-210ENST00000470443 EIF6P56537 245 aaKnown RBP8.23□□□□□ -1.09
PABPC4-210ENST00000470443 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
PABPC4-210ENST00000470443 GAS2L2Q8NHY3 880 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms