RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 PHKBQ93100 1093 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 AIDAQ96BJ3 306 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
TOP3A-203ENST00000469739 NPHP1O15259 732 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
TOP3A-203ENST00000469739 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 USP28Q96RU2 1077 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 BCL9O00512 1426 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 AP5Z1O43299 807 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 ME1P48163 572 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 CSPP1Q1MSJ5 1256 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 TSGA10IPQ3SY00 556 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 TBC1D10CQ8IV04 446 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
TOP3A-203ENST00000469739 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 MBD4O95243 580 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 GYG1P46976 350 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 PFKFB2O60825 505 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 PDE6AP16499 860 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 TRDNQ13061 729 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 ATP2B1P20020 1258 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 ANTXR2P58335 489 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 RESTQ13127 1097 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 TMEM87AQ8NBN3 555 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.04□□□□□ -0.641e-6■■■■□ 21.2
TOP3A-203ENST00000469739 DNAJC25Q9H1X3 360 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
TOP3A-203ENST00000469739 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-203ENST00000469739 FDPSP14324 419 aaKnown RBP11.03□□□□□ -0.64
TOP3A-203ENST00000469739 EIF5P55010 431 aaKnown RBP11.03□□□□□ -0.64
TOP3A-203ENST00000469739 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 ANO6Q4KMQ2 910 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 CYB5R4Q7L1T6 521 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
TOP3A-203ENST00000469739 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 MCM5P33992 734 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 SDR42E1Q8WUS8 393 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
TOP3A-203ENST00000469739 RIC1Q4ADV7 1423 aa11.03□□□□□ -0.64
TOP3A-203ENST00000469739 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
TOP3A-203ENST00000469739 HMGB1P09429 215 aaKnown RBP11.02□□□□□ -0.64
TOP3A-203ENST00000469739 ADD2P35612 726 aa11.02□□□□□ -0.64
TOP3A-203ENST00000469739 SF3A1Q15459 793 aaKnown RBP11.02□□□□□ -0.64
TOP3A-203ENST00000469739 ERFEQ4G0M1 354 aa11.02□□□□□ -0.64
TOP3A-203ENST00000469739 DRC7Q8IY82 874 aa11.02□□□□□ -0.64
TOP3A-203ENST00000469739 SPATA5Q8NB90 893 aa11.02□□□□□ -0.64
TOP3A-203ENST00000469739 NCOA7Q8NI08 942 aa11.02□□□□□ -0.64
TOP3A-203ENST00000469739 SCAND2PQ9GZW5 306 aaPredicted RBP11.02□□□□□ -0.64
TOP3A-203ENST00000469739 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 hCG_1642624A0A1W2PR95 340 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 KIF20AO95235 890 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 MARCKSP29966 332 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-203ENST00000469739 TYRO3Q06418 890 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.65
TOP3A-203ENST00000469739 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 PIBF1Q8WXW3 757 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 PDLIM2Q96JY6 352 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.65
TOP3A-203ENST00000469739 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 CTNNA3Q9UI47 895 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 CYP2D7A0A087X1C5 515 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 PRDM1O75626 825 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 IGHMBP2P38935 993 aaKnown RBP11.02□□□□□ -0.65
TOP3A-203ENST00000469739 TDO2P48775 406 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 CCAR1Q8IX12 1150 aaKnown RBP11.02□□□□□ -0.65
TOP3A-203ENST00000469739 VGLL2Q8N8G2 317 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 C8orf76Q96K31 380 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 NAPBQ9H115 298 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 RAI14Q9P0K7 980 aa11.02□□□□□ -0.65
TOP3A-203ENST00000469739 SPATA31A1Q5TZJ5 1347 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 BIN1O00499 593 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 NUP133Q8WUM0 1156 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 JCADQ9P266 1359 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 RGL2O15211 777 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 SLC5A1P13866 664 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 CHRNDQ07001 517 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-203ENST00000469739 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-203ENST00000469739 GNL2Q13823 731 aaKnown RBP11.01□□□□□ -0.65
TOP3A-203ENST00000469739 LRRFIP1Q32MZ4 808 aaKnown RBP11.01□□□□□ -0.65
TOP3A-203ENST00000469739 LCORLQ8N3X6 602 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 LPIN2Q92539 896 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
TOP3A-203ENST00000469739 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms