RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 GOLIM4O00461 696 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 PPEF1O14829 653 aaPredicted RBP9.89□□□□□ -0.83
RPA3-205ENST00000462723 SRGNP10124 158 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
RPA3-205ENST00000462723 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPA3-205ENST00000462723 CAVIN4Q5BKX8 364 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 C2CD5Q86YS7 1000 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 KBTBD3Q8NAB2 608 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 MASTLQ96GX5 879 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 TBC1D32Q96NH3 1257 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 PDGFDQ9GZP0 370 aaPredicted RBP9.89□□□□□ -0.83
RPA3-205ENST00000462723 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
RPA3-205ENST00000462723 LEMD3Q9Y2U8 911 aa9.89□□□□□ -0.83
RPA3-205ENST00000462723 COL11A2P13942 1736 aaPredicted RBP9.89□□□□□ -0.83
RPA3-205ENST00000462723 ZNF804BA4D1E1 1349 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 AKAP11Q9UKA4 1901 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 SNAP23O00161 211 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 LCE2BO14633 110 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 PHKA1P46020 1223 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 TTF1Q15361 905 aaPredicted RBP9.88□□□□□ -0.83
RPA3-205ENST00000462723 STYK1Q6J9G0 422 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
RPA3-205ENST00000462723 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 VPS37DQ86XT2 251 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 EDC3Q96F86 508 aaKnown RBP9.88□□□□□ -0.83
RPA3-205ENST00000462723 ZBED2Q9BTP6 218 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 NDUFB9Q9Y6M9 179 aa9.88□□□□□ -0.83
RPA3-205ENST00000462723 LRRC37AA6NMS7 1700 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 RAD50Q92878 1312 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 SGSM2O43147 1006 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 EPB41L2O43491 1005 aaKnown RBP9.87□□□□□ -0.83
RPA3-205ENST00000462723 ZFYP08048 801 aaPredicted RBP9.87□□□□□ -0.83
RPA3-205ENST00000462723 ATP2B4P23634 1241 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 POLD1P28340 1107 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 MCAMP43121 646 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 ZAP70P43403 619 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 BCAMP50895 628 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 SCARF1Q14162 830 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 SP8Q8IXZ3 490 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 SPATA5Q8NB90 893 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 ZNF622Q969S3 477 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPA3-205ENST00000462723 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPA3-205ENST00000462723 MTFR1LQ9H019 292 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 ANO2Q9NQ90 1003 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 ATP6V0A2Q9Y487 856 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 MYH7P12883 1935 aa9.87□□□□□ -0.83
RPA3-205ENST00000462723 SEMA3EO15041 775 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 ZBTB7AO95365 584 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 MCCP23508 829 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 HIBADHP31937 336 aaKnown RBP9.86□□□□□ -0.83
RPA3-205ENST00000462723 GYG1P46976 350 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 RBM25P49756 843 aaKnown RBP9.86□□□□□ -0.83
RPA3-205ENST00000462723 GPSM2P81274 684 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 NMIQ13287 307 aaPredicted RBP9.86□□□□□ -0.83
RPA3-205ENST00000462723 CACNA1SQ13698 1873 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 RASGRF1Q13972 1273 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 R3HDM1Q15032 1099 aaKnown RBP9.86□□□□□ -0.83
RPA3-205ENST00000462723 ZSCAN25Q6NSZ9 544 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 C10orf71Q711Q0 1435 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 USP26Q9BXU7 913 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 PODXL2Q9NZ53 605 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 HMG20BQ9P0W2 317 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 GGA1Q9UJY5 639 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 NSFL1CQ9UNZ2 370 aaKnown RBP9.86□□□□□ -0.83
RPA3-205ENST00000462723 MYH13Q9UKX3 1938 aa9.86□□□□□ -0.83
RPA3-205ENST00000462723 RNF113AO15541 343 aaKnown RBP9.85□□□□□ -0.83
RPA3-205ENST00000462723 FRAT2O75474 233 aaPredicted RBP9.85□□□□□ -0.83
RPA3-205ENST00000462723 UFL1O94874 794 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 PTPREP23469 700 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 TRAF7Q6Q0C0 670 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 PI16Q6UXB8 463 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 C15orf52Q6ZUT6 534 aaKnown RBP9.85□□□□□ -0.83
RPA3-205ENST00000462723 ZNF804AQ7Z570 1209 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 FBXO33Q7Z6M2 555 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
RPA3-205ENST00000462723 FAM227BQ96M60 508 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 ANTXR1Q9H6X2 564 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
RPA3-205ENST00000462723 DENND2AQ9ULE3 1009 aa9.85□□□□□ -0.83
RPA3-205ENST00000462723 PDS5AQ29RF7 1337 aaKnown RBP9.84□□□□□ -0.83
RPA3-205ENST00000462723 DLEC1Q9Y238 1755 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 A0A0D9SFI3 127 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 WTIPA6NIX2 430 aaPredicted RBP9.84□□□□□ -0.83
RPA3-205ENST00000462723 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 CYP2E1P05181 493 aaPredicted RBP9.84□□□□□ -0.83
RPA3-205ENST00000462723 KLRK1P26718 216 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 CHRNA5P30532 468 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 MAP3K12Q12852 859 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 DSG2Q14126 1118 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
RPA3-205ENST00000462723 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 HELLSQ9NRZ9 838 aa9.84□□□□□ -0.83
RPA3-205ENST00000462723 MED23Q9ULK4 1368 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms