RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 AS3MTQ9HBK9 375 aa10.97□□□□□ -0.65
DDX39B-215ENST00000462256 TRIM29Q14134 588 aa10.97□□□□□ -0.65
DDX39B-215ENST00000462256 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
DDX39B-215ENST00000462256 GLI3P10071 1580 aa10.97□□□□□ -0.65
DDX39B-215ENST00000462256 GLTPD2A6NH11 291 aa10.96□□□□□ -0.65
DDX39B-215ENST00000462256 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
DDX39B-215ENST00000462256 TDRD3Q9H7E2 651 aaKnown RBP10.96□□□□□ -0.65
DDX39B-215ENST00000462256 CRKP46108 304 aa10.96□□□□□ -0.65
DDX39B-215ENST00000462256 ZNF157P51786 506 aaPredicted RBP10.96□□□□□ -0.65
DDX39B-215ENST00000462256 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
DDX39B-215ENST00000462256 ANGEL2Q5VTE6 544 aaKnown RBP10.96□□□□□ -0.65
DDX39B-215ENST00000462256 DCTPP1Q9H773 170 aa10.96□□□□□ -0.65
DDX39B-215ENST00000462256 ZNF521Q96K83 1311 aa10.96□□□□□ -0.66
DDX39B-215ENST00000462256 ADORA1P30542 326 aa10.96□□□□□ -0.66
DDX39B-215ENST00000462256 FAM184AQ8NB25 1140 aa10.96□□□□□ -0.66
DDX39B-215ENST00000462256 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
DDX39B-215ENST00000462256 MFSD6Q6ZSS7 791 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 ARHGEF10LQ9HCE6 1279 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 ABCC12Q96J65 1359 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 ST18O60284 1047 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 TTC41PQ6P2S7 1318 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
DDX39B-215ENST00000462256 GADL1Q6ZQY3 521 aa10.95□□□□□ -0.66
DDX39B-215ENST00000462256 ALS2Q96Q42 1657 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 GPR108Q9NPR9 543 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 CSF1RP07333 972 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 GSE1Q14687 1217 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 DIXDC1Q155Q3 683 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 HSCBQ8IWL3 235 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 AKAP12Q02952 1782 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 COL3A1P02461 1466 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-215ENST00000462256 XBP1P17861 261 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 SCARF1Q14162 830 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 RASSF8Q8NHQ8 419 aa10.94□□□□□ -0.66
DDX39B-215ENST00000462256 HAND2P61296 217 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 FOXO4P98177 505 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 POLLQ9UGP5 575 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 TRMT2AQ8IZ69 625 aaKnown RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 EAF2Q96CJ1 260 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 MPHOSPH6Q99547 160 aaKnown RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 TOPAZ1Q8N9V7 1692 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 CCDC178Q5BJE1 867 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 CTCFLQ8NI51 663 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 CCDC43Q96MW1 224 aaKnown RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 ARMT1Q9H993 441 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 NWD2Q9ULI1 1742 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 PDE1AP54750 535 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 HDAC1Q13547 482 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-215ENST00000462256 KRT32Q14532 448 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 MIGA2Q7L4E1 593 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 ESR2Q92731 530 aa10.93□□□□□ -0.66
DDX39B-215ENST00000462256 EPS15P42566 896 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 LDHDQ86WU2 507 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 KAT14Q9H8E8 782 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 LTN1O94822 1766 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 CACNB3P54284 484 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 MCMDC2Q4G0Z9 681 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 APPBP2Q92624 585 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 ZNF532Q9HCE3 1301 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 IFIT3O14879 490 aaKnown RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 PTGER2P43116 358 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 MAPK8IP2Q13387 824 aaPredicted RBP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 RASA3Q14644 834 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
DDX39B-215ENST00000462256 TPRNQ4KMQ1 711 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 DPF2Q92785 391 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 WRNIP1Q96S55 665 aa10.92□□□□□ -0.66
DDX39B-215ENST00000462256 TOMM70O94826 608 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
DDX39B-215ENST00000462256 GBA2Q9HCG7 927 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-215ENST00000462256 SEC63Q9UGP8 760 aaKnown RBP10.91□□□□□ -0.66
DDX39B-215ENST00000462256 TRAF1Q13077 416 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 RASGRF1Q13972 1273 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 PIBF1Q8WXW3 757 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 ZNF341Q9BYN7 854 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 NDUFB9Q9Y6M9 179 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 TRPM3Q9HCF6 1732 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-215ENST00000462256 ATP5JP18859 108 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 MMP14P50281 582 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 TRIM22Q8IYM9 498 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 VTI1AQ96AJ9 217 aa10.91□□□□□ -0.66
DDX39B-215ENST00000462256 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms