RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 GPR108Q9NPR9 543 aa20.22■□□□□ 0.83
CHRD-208ENST00000460627 CETN1Q12798 172 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
CHRD-208ENST00000460627 TRIM21P19474 475 aaKnown RBP20.21■□□□□ 0.83
CHRD-208ENST00000460627 USP25Q9UHP3 1055 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 MTIF2P46199 727 aaKnown RBP20.21■□□□□ 0.83
CHRD-208ENST00000460627 LAMC1P11047 1609 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 TNS3Q68CZ2 1445 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 B4DLN1 442 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
CHRD-208ENST00000460627 MRPL12P52815 198 aaKnown RBP20.21■□□□□ 0.83
CHRD-208ENST00000460627 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
CHRD-208ENST00000460627 ZSCAN12O43309 604 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 NEMFO60524 1076 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 CPA1P15085 419 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 SYT1P21579 422 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 MTERF4Q7Z6M4 381 aaKnown RBP20.2■□□□□ 0.82
CHRD-208ENST00000460627 DNAI2Q9GZS0 605 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 CLEC11AQ9Y240 323 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 ABCA6Q8N139 1617 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 TBCAO75347 108 aaKnown RBP20.2■□□□□ 0.82
CHRD-208ENST00000460627 HSPA4P34932 840 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 SPA17Q15506 151 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 FAM177A1Q8N128 213 aaPredicted RBP20.2■□□□□ 0.82
CHRD-208ENST00000460627 AATFQ9NY61 560 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHRD-208ENST00000460627 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 MED14O60244 1454 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 CIAO1O76071 339 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 DESP17661 470 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 STAT6P42226 847 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
CHRD-208ENST00000460627 PIGBQ92521 554 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 GSDMDP57764 484 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 DACT1Q9NYF0 836 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 SAP30BPQ9UHR5 308 aaKnown RBP20.19■□□□□ 0.82
CHRD-208ENST00000460627 PPRC1Q5VV67 1664 aaKnown RBP20.19■□□□□ 0.82
CHRD-208ENST00000460627 CYP27B1O15528 508 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 EXOC1Q9NV70 894 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 PDE8BO95263 885 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
CHRD-208ENST00000460627 HAUS7Q99871 368 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
CHRD-208ENST00000460627 DEXIO95424 95 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 UBE4AQ14139 1066 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 CCDC40Q4G0X9 1142 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 SSH2Q76I76 1423 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 RXRAP19793 462 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
CHRD-208ENST00000460627 GIMAP6Q6P9H5 292 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 KRT27Q7Z3Y8 459 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
CHRD-208ENST00000460627 ZSCAN23Q3MJ62 389 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 GREM2Q9H772 168 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHRD-208ENST00000460627 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
CHRD-208ENST00000460627 RXRBP28702 533 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 KRT79Q5XKE5 535 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 CNKSR1Q969H4 720 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 HOOK2Q96ED9 719 aa20.17■□□□□ 0.82
CHRD-208ENST00000460627 NAP1L4Q99733 375 aaKnown RBP20.17■□□□□ 0.82
CHRD-208ENST00000460627 ERLIN2O94905 339 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 YEATS4O95619 227 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 SPAG1Q07617 926 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
CHRD-208ENST00000460627 GJA3Q9Y6H8 435 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 PATL2C9JE40 543 aaKnown RBP20.16■□□□□ 0.82
CHRD-208ENST00000460627 RILPL1Q5EBL4 403 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 TAF4BQ92750 862 aa20.16■□□□□ 0.82
CHRD-208ENST00000460627 PRAMEF22A3QJZ6 481 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 NIM1KQ8IY84 436 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
CHRD-208ENST00000460627 MAP7D2Q96T17 732 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 ARHGEF10LQ9HCE6 1279 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 PRDM1O75626 825 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 GSPT1P15170 499 aaKnown RBP20.15■□□□□ 0.82
CHRD-208ENST00000460627 CHRNDQ07001 517 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
CHRD-208ENST00000460627 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 TRIM47Q96LD4 638 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 GLT8D2Q9H1C3 349 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 DLC1Q96QB1 1528 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 PNPLA6Q8IY17 1366 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 SYCP3Q8IZU3 236 aa20.15■□□□□ 0.82
CHRD-208ENST00000460627 TCERG1LQ5VWI1 586 aa20.14■□□□□ 0.82
CHRD-208ENST00000460627 PPIP5K2O43314 1243 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 PDE6AP16499 860 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 AFMP43652 599 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 NLRP10Q86W26 655 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 FAM200AQ8TCP9 573 aa20.14■□□□□ 0.81
CHRD-208ENST00000460627 NUP88Q99567 741 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms