RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 GNAI2P04899 355 aa23.53■■□□□ 1.36
COL5A1-203ENST00000460264 SPDYE2Q495Y8 402 aa23.53■■□□□ 1.36
COL5A1-203ENST00000460264 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
COL5A1-203ENST00000460264 DZIP1LQ8IYY4 767 aaKnown RBP23.52■■□□□ 1.36
COL5A1-203ENST00000460264 PRKG1Q13976 671 aa23.51■■□□□ 1.35
COL5A1-203ENST00000460264 ARMC9Q7Z3E5 817 aa23.51■■□□□ 1.35
COL5A1-203ENST00000460264 TDRD3Q9H7E2 651 aaKnown RBP23.51■■□□□ 1.35
COL5A1-203ENST00000460264 ZNF70Q9UC06 446 aaPredicted RBP23.51■■□□□ 1.35
COL5A1-203ENST00000460264 CASP8AP2Q9UKL3 1982 aa23.51■■□□□ 1.35
COL5A1-203ENST00000460264 TEKT1Q969V4 418 aa23.5■■□□□ 1.35
COL5A1-203ENST00000460264 SUGT1Q9Y2Z0 365 aa23.5■■□□□ 1.35
COL5A1-203ENST00000460264 OTOFQ9HC10 1997 aa23.5■■□□□ 1.35
COL5A1-203ENST00000460264 TNFAIP1Q13829 316 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 RASA3Q14644 834 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 LDLRAD1Q5T700 205 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 WDR66Q8TBY9 1149 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 ANGEL1Q9UNK9 670 aaKnown RBP23.49■■□□□ 1.35
COL5A1-203ENST00000460264 FZD1Q9UP38 647 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 MAST3O60307 1309 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 LAMB1P07942 1786 aa23.49■■□□□ 1.35
COL5A1-203ENST00000460264 ADORA1P30542 326 aa23.48■■□□□ 1.35
COL5A1-203ENST00000460264 PHKA1P46020 1223 aa23.48■■□□□ 1.35
COL5A1-203ENST00000460264 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
COL5A1-203ENST00000460264 CSRNP1Q96S65 589 aa23.48■■□□□ 1.35
COL5A1-203ENST00000460264 GNL3LQ9NVN8 582 aaKnown RBP23.48■■□□□ 1.35
COL5A1-203ENST00000460264 SAGE1Q9NXZ1 904 aa23.48■■□□□ 1.35
COL5A1-203ENST00000460264 PNMA6EA0A0J9YXQ4 647 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 RLBP1P12271 317 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 SUPT20HL1Q3ZLR7 823 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 NBPF12Q5TAG4 269 aaPredicted RBP23.47■■□□□ 1.35
COL5A1-203ENST00000460264 REM2Q8IYK8 340 aaPredicted RBP23.47■■□□□ 1.35
COL5A1-203ENST00000460264 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 MRIQ9BWK5 157 aa23.47■■□□□ 1.35
COL5A1-203ENST00000460264 TFCP2Q12800 502 aa23.46■■□□□ 1.35
COL5A1-203ENST00000460264 SEMA3EO15041 775 aa23.45■■□□□ 1.34
COL5A1-203ENST00000460264 ZBTB22O15209 634 aa23.45■■□□□ 1.34
COL5A1-203ENST00000460264 PPP1R12BO60237 982 aaPredicted RBP23.45■■□□□ 1.34
COL5A1-203ENST00000460264 CAPN15O75808 1086 aa23.45■■□□□ 1.34
COL5A1-203ENST00000460264 RNF186Q9NXI6 227 aa23.45■■□□□ 1.34
COL5A1-203ENST00000460264 A0A1B0GUL7 405 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 TCP10L2B9ZVM9 353 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 TIMM10P62072 90 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 CCDC102BQ68D86 513 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 APOBEC3HQ6NTF7 200 aaKnown RBP23.44■■□□□ 1.34
COL5A1-203ENST00000460264 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 TEPSINQ96N21 525 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 DENND2AQ9ULE3 1009 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 AKAP2Q9Y2D5 859 aa23.44■■□□□ 1.34
COL5A1-203ENST00000460264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.44■■□□□ 1.34
COL5A1-203ENST00000460264 MYH2Q9UKX2 1941 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 SALL1Q9NSC2 1324 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 TRPA1O75762 1119 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 TNNI2P48788 182 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 HHIPL2Q6UWX4 724 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 CDAN1Q8IWY9 1227 aa23.43■■□□□ 1.34
COL5A1-203ENST00000460264 PRDX5P30044 214 aa23.42■■□□□ 1.34
COL5A1-203ENST00000460264 CACNB3P54284 484 aa23.42■■□□□ 1.34
COL5A1-203ENST00000460264 MKRN3Q13064 507 aaKnown RBP23.42■■□□□ 1.34
COL5A1-203ENST00000460264 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
COL5A1-203ENST00000460264 CLMNQ96JQ2 1002 aa23.42■■□□□ 1.34
COL5A1-203ENST00000460264 TMEM39BQ9GZU3 492 aa23.42■■□□□ 1.34
COL5A1-203ENST00000460264 PDS5AQ29RF7 1337 aaKnown RBP23.41■■□□□ 1.34
COL5A1-203ENST00000460264 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
COL5A1-203ENST00000460264 POLA2Q14181 598 aa23.41■■□□□ 1.34
COL5A1-203ENST00000460264 SPRYD7Q5W111 196 aa23.41■■□□□ 1.34
COL5A1-203ENST00000460264 XAGE2Q96GT9 111 aa23.41■■□□□ 1.34
COL5A1-203ENST00000460264 C1orf115Q9H7X2 142 aa23.41■■□□□ 1.34
COL5A1-203ENST00000460264 TMOD2Q9NZR1 351 aa23.41■■□□□ 1.34
COL5A1-203ENST00000460264 UNCXA6NJT0 531 aa23.4■■□□□ 1.34
COL5A1-203ENST00000460264 ZBTB7BO15156 539 aaPredicted RBP23.4■■□□□ 1.34
COL5A1-203ENST00000460264 LDHBP07195 334 aaKnown RBP23.4■■□□□ 1.34
COL5A1-203ENST00000460264 IREB2P48200 963 aaKnown RBP23.4■■□□□ 1.34
COL5A1-203ENST00000460264 G3BP1Q13283 466 aaKnown RBP eCLIP23.4■■□□□ 1.34
COL5A1-203ENST00000460264 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
COL5A1-203ENST00000460264 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
COL5A1-203ENST00000460264 FKBP1CQ5VVH2 108 aa23.4■■□□□ 1.34
COL5A1-203ENST00000460264 SSH3Q8TE77 659 aa23.4■■□□□ 1.34
COL5A1-203ENST00000460264 DAGLAQ9Y4D2 1042 aa23.4■■□□□ 1.34
COL5A1-203ENST00000460264 SLC10A4Q96EP9 437 aa23.39■■□□□ 1.33
COL5A1-203ENST00000460264 TM4SF4P48230 202 aa23.38■■□□□ 1.33
COL5A1-203ENST00000460264 ATP8B2P98198 1209 aa23.38■■□□□ 1.33
COL5A1-203ENST00000460264 SREBF2Q12772 1141 aa23.38■■□□□ 1.33
COL5A1-203ENST00000460264 FAM83AQ86UY5 434 aa23.38■■□□□ 1.33
COL5A1-203ENST00000460264 PANK1Q8TE04 598 aa23.38■■□□□ 1.33
COL5A1-203ENST00000460264 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
COL5A1-203ENST00000460264 ZBTB48P10074 688 aaPredicted RBP23.37■■□□□ 1.33
COL5A1-203ENST00000460264 ANKRD13AQ8IZ07 590 aa23.37■■□□□ 1.33
COL5A1-203ENST00000460264 ZGPATQ8N5A5 531 aaKnown RBP23.37■■□□□ 1.33
COL5A1-203ENST00000460264 WNK4Q96J92 1243 aa23.37■■□□□ 1.33
COL5A1-203ENST00000460264 NEUROD6Q96NK8 337 aa23.37■■□□□ 1.33
COL5A1-203ENST00000460264 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.37■■□□□ 1.33
COL5A1-203ENST00000460264 CDC42EP5Q6NZY7 148 aa23.35■■□□□ 1.33
COL5A1-203ENST00000460264 ABHD8Q96I13 439 aa23.35■■□□□ 1.33
COL5A1-203ENST00000460264 AK9Q5TCS8 1911 aa23.35■■□□□ 1.33
COL5A1-203ENST00000460264 GORABQ5T7V8 394 aa23.34■■□□□ 1.33
COL5A1-203ENST00000460264 ABCF2Q9UG63 623 aa23.34■■□□□ 1.33
COL5A1-203ENST00000460264 DOCK2Q92608 1830 aa23.33■■□□□ 1.33
COL5A1-203ENST00000460264 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.33
COL5A1-203ENST00000460264 SURF6O75683 361 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms