RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 GNL3LQ9NVN8 582 aaKnown RBP12.43□□□□□ -0.42
RFX3-210ENST00000457373 HSPA6P17066 643 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
RFX3-210ENST00000457373 HSP90AB4PQ58FF6 505 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 GPR108Q9NPR9 543 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 ZNF609O15014 1411 aa12.42□□□□□ -0.42
RFX3-210ENST00000457373 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
RFX3-210ENST00000457373 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
RFX3-210ENST00000457373 SCARF1Q14162 830 aa12.41□□□□□ -0.42
RFX3-210ENST00000457373 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
RFX3-210ENST00000457373 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
RFX3-210ENST00000457373 RHPN1Q8TCX5 695 aa12.41□□□□□ -0.42
RFX3-210ENST00000457373 CCDC8Q9H0W5 538 aaPredicted RBP12.41□□□□□ -0.42
RFX3-210ENST00000457373 IL1RAPL2Q9NP60 686 aa12.41□□□□□ -0.42
RFX3-210ENST00000457373 TTF2Q9UNY4 1162 aaKnown RBP12.41□□□□□ -0.42
RFX3-210ENST00000457373 ASTN2O75129 1339 aaPredicted RBP12.4□□□□□ -0.42
RFX3-210ENST00000457373 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
RFX3-210ENST00000457373 FMR1Q06787 632 aaKnown RBP eCLIP12.4□□□□□ -0.42
RFX3-210ENST00000457373 GRIK5Q16478 980 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 NBPF9Q3BBW0 867 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 USP48Q86UV5 1035 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
RFX3-210ENST00000457373 TBC1D22AQ8WUA7 517 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 DCPSQ96C86 337 aaKnown RBP12.4□□□□□ -0.42
RFX3-210ENST00000457373 DBNDD2Q9BQY9 259 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 GLIS2Q9BZE0 524 aaPredicted RBP12.4□□□□□ -0.42
RFX3-210ENST00000457373 PGAP2Q9UHJ9 254 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 DENND2AQ9ULE3 1009 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
RFX3-210ENST00000457373 TRAF5O00463 557 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 WNT10BO00744 389 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 MMP14P50281 582 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 APLP1P51693 650 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 HTRA3P83110 453 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 DLGAP5Q15398 846 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 TTC39AQ5SRH9 613 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 ANGEL2Q5VTE6 544 aaKnown RBP12.39□□□□□ -0.43
RFX3-210ENST00000457373 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 WDR66Q8TBY9 1149 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 EAF2Q96CJ1 260 aaPredicted RBP12.39□□□□□ -0.43
RFX3-210ENST00000457373 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 PCDHAC2Q9Y5I4 1007 aa12.39□□□□□ -0.43
RFX3-210ENST00000457373 COL1A1P02452 1464 aaPredicted RBP12.39□□□□□ -0.43
RFX3-210ENST00000457373 SEMA3EO15041 775 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
RFX3-210ENST00000457373 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
RFX3-210ENST00000457373 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 AACSQ86V21 672 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
RFX3-210ENST00000457373 TLR7Q9NYK1 1049 aaKnown RBP12.38□□□□□ -0.43
RFX3-210ENST00000457373 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
RFX3-210ENST00000457373 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 ADM5C9JUS6 153 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 CRKP46108 304 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
RFX3-210ENST00000457373 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
RFX3-210ENST00000457373 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 HMG20BQ9P0W2 317 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 DBNLQ9UJU6 430 aaKnown RBP12.37□□□□□ -0.43
RFX3-210ENST00000457373 TRPM7Q96QT4 1865 aa12.37□□□□□ -0.43
RFX3-210ENST00000457373 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
RFX3-210ENST00000457373 LDHBP07195 334 aaKnown RBP12.36□□□□□ -0.43
RFX3-210ENST00000457373 ARID4AP29374 1257 aaPredicted RBP12.36□□□□□ -0.43
RFX3-210ENST00000457373 PRDX5P30044 214 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 SPATA5Q8NB90 893 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
RFX3-210ENST00000457373 DCTPP1Q9H773 170 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 ECM29Q5VYK3 1845 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 MAST3O60307 1309 aa12.36□□□□□ -0.43
RFX3-210ENST00000457373 CLRN2A0PK11 232 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 TMEM88BA6NKF7 163 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 MYO1BO43795 1136 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
RFX3-210ENST00000457373 MCAMP43121 646 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 ZGPATQ8N5A5 531 aaKnown RBP12.35□□□□□ -0.43
RFX3-210ENST00000457373 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
RFX3-210ENST00000457373 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
RFX3-210ENST00000457373 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
RFX3-210ENST00000457373 SALL1Q9NSC2 1324 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms