RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CBX8Q9HC52 389 aa21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 CCDC87Q9NVE4 849 aa21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 ZNF532Q9HCE3 1301 aa21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 DHX16O60231 1041 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 IDH1O75874 414 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 CCAR1Q8IX12 1150 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-209ENST00000456560 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
SEMA3B-209ENST00000456560 FAM98CQ17RN3 349 aaKnown RBP21.5■■□□□ 1.03
SEMA3B-209ENST00000456560 LUZP1Q86V48 1076 aa21.5■■□□□ 1.03
SEMA3B-209ENST00000456560 HELBQ8NG08 1087 aaPredicted RBP21.5■■□□□ 1.03
SEMA3B-209ENST00000456560 WWC3Q9ULE0 1092 aa21.5■■□□□ 1.03
SEMA3B-209ENST00000456560 GOLGA8BA8MQT2 603 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 PLCB2Q00722 1185 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 TBC1D10CQ8IV04 446 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 GOLPH3LQ9H4A5 285 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 TTC12Q9H892 705 aaPredicted RBP21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 RREB1Q92766 1687 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 AFF2P51816 1311 aa21.49■■□□□ 1.03
SEMA3B-209ENST00000456560 SNW1Q13573 536 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 ALX1Q15699 326 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 ENGASEQ8NFI3 743 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 NKX2-3Q8TAU0 364 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 PIBF1Q8WXW3 757 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 STRBPQ96SI9 672 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 UTP14AQ9BVJ6 771 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 RTEL1Q9NZ71 1219 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 C4BP0C0L5 1744 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 CRKLP46109 303 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 FBXO18Q8NFZ0 1043 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 TDRD7Q8NHU6 1098 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 C8orf76Q96K31 380 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 DENND2AQ9ULE3 1009 aa21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 THRAP3Q9Y2W1 955 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-209ENST00000456560 CTAGE5O15320 804 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 CAMTA2O94983 1202 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 SLC5A1P13866 664 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 VPS72Q15906 364 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 CYB5R4Q7L1T6 521 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 SPATA5Q8NB90 893 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 RGS22Q8NE09 1264 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 ORC3Q9UBD5 711 aaPredicted RBP21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 CAVIN2O95810 425 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 TPM3P06753 285 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 TRDNQ13061 729 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 DDB1Q16531 1140 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 OTUD7BQ6GQQ9 843 aa21.47■■□□□ 1.03
SEMA3B-209ENST00000456560 A0A0G2JS52 829 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 SH2B2O14492 632 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 ATP6V1AP38606 617 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 PARP10Q53GL7 1025 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 SEC31BQ9NQW1 1179 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 DOCK2Q92608 1830 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 CICQ96RK0 1608 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 ZMYM6O95789 1325 aa21.46■■□□□ 1.03
SEMA3B-209ENST00000456560 ANGEL1Q9UNK9 670 aaKnown RBP21.45■■□□□ 1.03
SEMA3B-209ENST00000456560 APPP05067 770 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 FAM160A1Q05DH4 1040 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 ITPK1Q13572 414 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 CCDC73Q6ZRK6 1079 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 RAB11FIP4Q86YS3 637 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 MARCH10Q8NA82 808 aaPredicted RBP21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 DNAJC25Q9H1X3 360 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 RTL9Q8NET4 1388 aa21.45■■□□□ 1.02
SEMA3B-209ENST00000456560 LOC102724428A0A0B4J2F2 783 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 CPLX1O14810 134 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 ZNF165P49910 485 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 SIK1P57059 783 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 DNTTIP2Q5QJE6 756 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 PCDHA7Q9UN72 937 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 ME1P48163 572 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 NOLC1Q14978 699 aaKnown RBP eCLIP21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 LINC00301Q8NCQ3 95 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 ACSBG1Q96GR2 724 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 KCNF1Q9H3M0 494 aa21.44■■□□□ 1.02
SEMA3B-209ENST00000456560 PATL2C9JE40 543 aaKnown RBP21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 SNAP23O00161 211 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 BRAPQ7Z569 592 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 FSIP1Q8NA03 581 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 SPTLC3Q9NUV7 552 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 A0A1W2PQ27 194 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 A0A1W2PQ64 194 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 A0A1W2PQD8 194 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 NTSR2O95665 410 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 ADALQ6DHV7 355 aa21.43■■□□□ 1.02
SEMA3B-209ENST00000456560 MYH14Q7Z406 1995 aaKnown RBP21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 GOLGA6L6A8MZA4 724 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 MAP3K12Q12852 859 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 IQCB1Q15051 598 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 CCDC152Q4G0S7 254 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 BARGINQ6ZT62 677 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 PLA2G4DQ86XP0 818 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 IFNL3Q8IZI9 196 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 MAGEB6Q8N7X4 407 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 SPC24Q8NBT2 197 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms