RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 GADD45BO75293 160 aaPredicted RBP6.94□□□□□ -1.3
LINC00393-202ENST00000452852 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
LINC00393-202ENST00000452852 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.94□□□□□ -1.3
LINC00393-202ENST00000452852 ZSCAN29Q8IWY8 852 aaPredicted RBP6.94□□□□□ -1.3
LINC00393-202ENST00000452852 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
LINC00393-202ENST00000452852 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
LINC00393-202ENST00000452852 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
LINC00393-202ENST00000452852 PNMA6FA0A0J9YX94 578 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 ESRRAP11474 423 aaPredicted RBP6.93□□□□□ -1.3
LINC00393-202ENST00000452852 ARL4DP49703 201 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 C19orf57Q0VDD7 668 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 DUOXA2Q1HG44 320 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 UBASH3BQ8TF42 649 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
LINC00393-202ENST00000452852 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
LINC00393-202ENST00000452852 MAPK8P45983 427 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 NLRP12P59046 1061 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 PCDH1Q08174 1060 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
LINC00393-202ENST00000452852 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 MCTP1Q6DN14 999 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 KIAA1211Q6ZU35 1233 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 ACAD11Q709F0 780 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
LINC00393-202ENST00000452852 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC00393-202ENST00000452852 GRM2Q14416 872 aa6.91□□□□□ -1.3
LINC00393-202ENST00000452852 ZNF423Q2M1K9 1284 aa6.91□□□□□ -1.3
LINC00393-202ENST00000452852 CLEC4MQ9H2X3 399 aaPredicted RBP6.91□□□□□ -1.3
LINC00393-202ENST00000452852 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
LINC00393-202ENST00000452852 NLRP2Q9NX02 1062 aa6.91□□□□□ -1.3
LINC00393-202ENST00000452852 WIZO95785 1651 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 RBM47A0AV96 593 aaKnown RBP6.9□□□□□ -1.3
LINC00393-202ENST00000452852 GLB1P16278 677 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 ITPKAP23677 461 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
LINC00393-202ENST00000452852 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
LINC00393-202ENST00000452852 Q6ZS46 218 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.3
LINC00393-202ENST00000452852 GLIS3Q8NEA6 775 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
LINC00393-202ENST00000452852 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
LINC00393-202ENST00000452852 PDS5BQ9NTI5 1447 aa6.9□□□□□ -1.31
LINC00393-202ENST00000452852 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
LINC00393-202ENST00000452852 GSTM4Q03013 218 aa6.89□□□□□ -1.31
LINC00393-202ENST00000452852 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00393-202ENST00000452852 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
LINC00393-202ENST00000452852 ZNF576Q9H609 170 aa6.89□□□□□ -1.31
LINC00393-202ENST00000452852 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
LINC00393-202ENST00000452852 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
LINC00393-202ENST00000452852 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
LINC00393-202ENST00000452852 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
LINC00393-202ENST00000452852 RUSC1Q9BVN2 902 aa6.88□□□□□ -1.31
LINC00393-202ENST00000452852 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
LINC00393-202ENST00000452852 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
LINC00393-202ENST00000452852 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
LINC00393-202ENST00000452852 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
LINC00393-202ENST00000452852 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
LINC00393-202ENST00000452852 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
LINC00393-202ENST00000452852 NXPE4Q6UWF7 544 aa6.87□□□□□ -1.31
LINC00393-202ENST00000452852 DLGAP3O95886 979 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 B3GALT4O96024 378 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 FCGRTP55899 365 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 FZD5Q13467 585 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 FBF1Q8TES7 1133 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 MRRFQ96E11 262 aaKnown RBP6.86□□□□□ -1.31
LINC00393-202ENST00000452852 NRSN2Q9GZP1 204 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 RNF208Q9H0X6 261 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
LINC00393-202ENST00000452852 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
LINC00393-202ENST00000452852 MEGF11A6BM72 1044 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 FAAP100Q0VG06 881 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 CEP41Q9BYV8 373 aa6.85□□□□□ -1.31
LINC00393-202ENST00000452852 CADPSQ9ULU8 1353 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 EIF4EBP3O60516 100 aaPredicted RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 LDHBP07195 334 aaKnown RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 ZNF157P51786 506 aaPredicted RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 ATP2B2Q01814 1243 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 RPS26P11Q5JNZ5 115 aaPredicted RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 PRR23CQ6ZRP0 262 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 ARMC10Q8N2F6 343 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 FAM46AQ96IP4 442 aaKnown RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 TRIM56Q9BRZ2 755 aaKnown RBP6.84□□□□□ -1.31
LINC00393-202ENST00000452852 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 TMPRSS13Q9BYE2 586 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 OSBPL7Q9BZF2 842 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 PRDM2Q13029 1718 aa6.84□□□□□ -1.31
LINC00393-202ENST00000452852 CYP11A1P05108 521 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 CTSBP07858 339 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 ERCC3P19447 782 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 MAOBP27338 520 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 POU4F3Q15319 338 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 EXOSC6Q5RKV6 272 aaKnown RBP6.83□□□□□ -1.32
LINC00393-202ENST00000452852 NUTM2GQ5VZR2 741 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms