RNA–Protein interactions for RNA: ENST00000448649.1

EXOSC3P1-201, Transcript of exosome component 3 pseudogene 1, humanhuman

BASIC

Gene EXOSC3P1, Length 500 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3P1-201ENST00000448649 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
EXOSC3P1-201ENST00000448649 PARP2Q9UGN5 583 aa8.42□□□□□ -1.06
EXOSC3P1-201ENST00000448649 POU4F3Q15319 338 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 KIAA1211Q6ZU35 1233 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 C3orf58Q8NDZ4 430 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 UBASH3BQ8TF42 649 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 RUSC1Q9BVN2 902 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 GPN3Q9UHW5 284 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3P1-201ENST00000448649 MEGF11A6BM72 1044 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 ALX3O95076 343 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 USP17L7P0C7H9 530 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 DAB2P98082 770 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 FAAP100Q0VG06 881 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 PSMD2Q13200 908 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 ZNF326Q5BKZ1 582 aaKnown RBP8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 Q6ZS46 218 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 AGGF1Q8N302 714 aaeCLIP8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 CORO1BQ9BR76 489 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 CEP44Q9C0F1 390 aa8.4□□□□□ -1.06
EXOSC3P1-201ENST00000448649 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 GLB1P16278 677 aa8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 EXOSC6Q5RKV6 272 aaKnown RBP8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 ANKRD34AQ69YU3 496 aa8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 NRSN2Q9GZP1 204 aa8.39□□□□□ -1.07
EXOSC3P1-201ENST00000448649 MAOBP27338 520 aa8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 HNRNPUQ00839 825 aaKnown RBP eCLIP8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 DOC2BQ14184 412 aa8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 DZIP1LQ8IYY4 767 aaKnown RBP8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TRIM56Q9BRZ2 755 aaKnown RBP8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 CYP4F12Q9HCS2 524 aa8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
EXOSC3P1-201ENST00000448649 FDX2Q6P4F2 183 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TP53INP1Q96A56 240 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 NECAB3Q96P71 396 aaPredicted RBP8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TMPRSS13Q9BYE2 586 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SAMM50Q9Y512 469 aa8.37□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 UVSSAQ2YD98 709 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TPTE2Q6XPS3 522 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SMG8Q8ND04 991 aaKnown RBP8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 GIPC2Q8TF65 315 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 EMILIN2Q9BXX0 1053 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SUGCTQ9HAC7 445 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 RNF19AQ9NV58 838 aa8.36□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SORBS3O60504 671 aa8.35□□□□□ -1.07
EXOSC3P1-201ENST00000448649 NME2P22392 152 aa8.35□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
EXOSC3P1-201ENST00000448649 TTF2Q9UNY4 1162 aaKnown RBP8.35□□□□□ -1.07
EXOSC3P1-201ENST00000448649 DLGAP3O95886 979 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 GSTP1P09211 210 aaKnown RBP8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 ARNTP27540 789 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 UBL7Q96S82 380 aaPredicted RBP8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 RAD18Q9NS91 495 aa8.34□□□□□ -1.07
EXOSC3P1-201ENST00000448649 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
EXOSC3P1-201ENST00000448649 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
EXOSC3P1-201ENST00000448649 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
EXOSC3P1-201ENST00000448649 KRT82Q9NSB4 513 aa8.33□□□□□ -1.08
EXOSC3P1-201ENST00000448649 ENC1O14682 589 aa8.32□□□□□ -1.08
EXOSC3P1-201ENST00000448649 CTSBP07858 339 aa8.32□□□□□ -1.08
EXOSC3P1-201ENST00000448649 FAM46AQ96IP4 442 aaKnown RBP8.32□□□□□ -1.08
EXOSC3P1-201ENST00000448649 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
EXOSC3P1-201ENST00000448649 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
EXOSC3P1-201ENST00000448649 SYNGAP1Q96PV0 1343 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 FBXO24O75426 580 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 ECEL1O95672 775 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 FURINP09958 794 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 LRRC14Q15048 493 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 RSPO4Q2I0M5 234 aaPredicted RBP8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 KCNB2Q92953 911 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 UTP4Q969X6 686 aaKnown RBP8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 CRELD1Q96HD1 420 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 HIF3AQ9Y2N7 669 aa8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
EXOSC3P1-201ENST00000448649 GAS2O43903 313 aaKnown RBP8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 TIAF1O95411 115 aa8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 SLFN14P0C7P3 912 aa8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 ZNF16P17020 682 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 PREPP48147 710 aa8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 ST13P50502 369 aaKnown RBP8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 SOX4Q06945 474 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 CCDC85BQ15834 202 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 PDZD3Q86UT5 571 aa8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
EXOSC3P1-201ENST00000448649 CBX8Q9HC52 389 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms