RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 VEGFBP49765 207 aa18.27■□□□□ 0.52
HDAC4-204ENST00000446876 DEFB115Q30KQ5 88 aa18.27■□□□□ 0.52
HDAC4-204ENST00000446876 PAXIP1Q6ZW49 1069 aaPredicted RBP18.27■□□□□ 0.52
HDAC4-204ENST00000446876 APOBEC3FQ8IUX4 373 aaKnown RBP18.27■□□□□ 0.52
HDAC4-204ENST00000446876 GPR108Q9NPR9 543 aa18.27■□□□□ 0.52
HDAC4-204ENST00000446876 AKAP11Q9UKA4 1901 aa18.27■□□□□ 0.51
HDAC4-204ENST00000446876 MYH2Q9UKX2 1941 aa18.27■□□□□ 0.51
HDAC4-204ENST00000446876 HMMRO75330 724 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 GRM1Q13255 1194 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 SAPCD2Q86UD0 394 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 EAF2Q96CJ1 260 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-204ENST00000446876 CCDC8Q9H0W5 538 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-204ENST00000446876 TDRD3Q9H7E2 651 aaKnown RBP18.26■□□□□ 0.51
HDAC4-204ENST00000446876 GBA2Q9HCG7 927 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-204ENST00000446876 IL1RAPL2Q9NP60 686 aa18.26■□□□□ 0.51
HDAC4-204ENST00000446876 SALL1Q9NSC2 1324 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 PAPPA2Q9BXP8 1791 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 MYO5AQ9Y4I1 1855 aaKnown RBP18.25■□□□□ 0.51
HDAC4-204ENST00000446876 MYO1BO43795 1136 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
HDAC4-204ENST00000446876 MCAMP43121 646 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 CRBNQ96SW2 442 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
HDAC4-204ENST00000446876 DBNLQ9UJU6 430 aaKnown RBP18.25■□□□□ 0.51
HDAC4-204ENST00000446876 SUGT1Q9Y2Z0 365 aa18.25■□□□□ 0.51
HDAC4-204ENST00000446876 MAST3O60307 1309 aa18.24■□□□□ 0.51
HDAC4-204ENST00000446876 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
HDAC4-204ENST00000446876 HDLBPQ00341 1268 aaKnown RBP18.24■□□□□ 0.51
HDAC4-204ENST00000446876 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
HDAC4-204ENST00000446876 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
HDAC4-204ENST00000446876 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
HDAC4-204ENST00000446876 ABCF2Q9UG63 623 aa18.24■□□□□ 0.51
HDAC4-204ENST00000446876 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
HDAC4-204ENST00000446876 ZBTB22O15209 634 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 CACNB3P54284 484 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 HUNKP57058 714 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 AACSQ86V21 672 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 C2orf69Q8N8R5 385 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 ZDHHC15Q96MV8 337 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 DEFB129Q9H1M3 183 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 SNRKQ9NRH2 765 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
HDAC4-204ENST00000446876 SSC5DA1L4H1 1573 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 TCP10L2B9ZVM9 353 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 HSP90AB4PQ58FF6 505 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
HDAC4-204ENST00000446876 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 CAPNS2Q96L46 248 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 FZD1Q9UP38 647 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
HDAC4-204ENST00000446876 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
HDAC4-204ENST00000446876 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 PRKG1Q13976 671 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 HHIPL2Q6UWX4 724 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 CDAN1Q8IWY9 1227 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
HDAC4-204ENST00000446876 PCDHB15Q9Y5E8 787 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.51
HDAC4-204ENST00000446876 AOC2O75106 756 aa18.2■□□□□ 0.5
HDAC4-204ENST00000446876 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-204ENST00000446876 RASA3Q14644 834 aa18.2■□□□□ 0.5
HDAC4-204ENST00000446876 DZIP1Q86YF9 867 aaKnown RBP18.2■□□□□ 0.5
HDAC4-204ENST00000446876 KIF1BPQ96EK5 621 aa18.2■□□□□ 0.5
HDAC4-204ENST00000446876 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
HDAC4-204ENST00000446876 NBPF12Q5TAG4 269 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-204ENST00000446876 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
HDAC4-204ENST00000446876 ZNF384Q8TF68 577 aa18.19■□□□□ 0.5
HDAC4-204ENST00000446876 PPP2R3BQ9Y5P8 575 aa18.19■□□□□ 0.5
HDAC4-204ENST00000446876 NDUFB9Q9Y6M9 179 aa18.19■□□□□ 0.5
HDAC4-204ENST00000446876 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 NF2P35240 595 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 ECE1P42892 770 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 ZAP70P43403 619 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 MECOMQ03112 1051 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
HDAC4-204ENST00000446876 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 TMEM39BQ9GZU3 492 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 OTOFQ9HC10 1997 aa18.18■□□□□ 0.5
HDAC4-204ENST00000446876 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
HDAC4-204ENST00000446876 TNFAIP1Q13829 316 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 RGMBQ6NW40 437 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 CDC42EP5Q6NZY7 148 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
HDAC4-204ENST00000446876 TMOD2Q9NZR1 351 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 RAI14Q9P0K7 980 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 PCNTO95613 3336 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 GAKO14976 1311 aa18.17■□□□□ 0.5
HDAC4-204ENST00000446876 AK9Q5TCS8 1911 aa18.16■□□□□ 0.5
HDAC4-204ENST00000446876 CYP2E1P05181 493 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms