RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CACNA2D4Q7Z3S7 1137 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 EHBP1Q8NDI1 1231 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 NEURL4Q96JN8 1562 aa19■□□□□ 0.63
TCOF1-206ENST00000445265 CUTAO60888 179 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 ERLIN2O94905 339 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 MEX3CQ5U5Q3 659 aaKnown RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 TAF4BQ92750 862 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 KCNH3Q9ULD8 1083 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 FANCCQ00597 558 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 USP28Q96RU2 1077 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 UTP14AQ9BVJ6 771 aaKnown RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 ANKIB1Q9P2G1 1089 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 ITGA6P23229 1130 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 ARHGEF25Q86VW2 580 aa18.99■□□□□ 0.63
TCOF1-206ENST00000445265 SEC62Q99442 399 aaKnown RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 DBNLQ9UJU6 430 aaKnown RBP18.99■□□□□ 0.63
TCOF1-206ENST00000445265 MBD4O95243 580 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 TUBB4BP68371 445 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 CALML4Q96GE6 196 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 BAG3O95817 575 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 GNAQP50148 359 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 TRIM47Q96LD4 638 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 MAGEB6P1A0A0J9YX57 407 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 PAFAH1B1P43034 410 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 MYSM1Q5VVJ2 828 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 MRFAP1L1Q96HT8 127 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■■■■ 35.6
TCOF1-206ENST00000445265 CYP2E1P05181 493 aaPredicted RBP18.98■□□□□ 0.63
TCOF1-206ENST00000445265 KRT2P35908 639 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 ADCY9O60503 1353 aa18.98■□□□□ 0.63
TCOF1-206ENST00000445265 HSPD1P10809 573 aaKnown RBP18.97■□□□□ 0.63
TCOF1-206ENST00000445265 MTX1Q13505 466 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 IQSEC3Q9UPP2 1182 aaPredicted RBP18.97■□□□□ 0.63
TCOF1-206ENST00000445265 TLR7Q9NYK1 1049 aaKnown RBP18.97■□□□□ 0.63
TCOF1-206ENST00000445265 ZDHHC9Q9Y397 364 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 CALML3P27482 149 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.63
TCOF1-206ENST00000445265 STAT6P42226 847 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 CEP112Q8N8E3 955 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
TCOF1-206ENST00000445265 BCL2L12Q9HB09 334 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 MRVI1Q9Y6F6 885 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 KIF20AO95235 890 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 DEXIO95424 95 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 GOLGA1Q92805 767 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 TSPYL1Q9H0U9 437 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 KIAA1468Q9P260 1216 aa18.97■□□□□ 0.63
TCOF1-206ENST00000445265 KIAA0754O94854 1291 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 PUM3Q15397 648 aaKnown RBP18.96■□□□□ 0.63
TCOF1-206ENST00000445265 KRT40Q6A162 431 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 TDRD7Q8NHU6 1098 aaKnown RBP18.96■□□□□ 0.63
TCOF1-206ENST00000445265 CTAGE15A4D2H0 777 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 CTAGE8P0CG41 777 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 SYCP1Q15431 976 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 SKIDA1Q1XH10 827 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 CTAGE6Q86UF2 777 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 CTAGE4Q8IX94 777 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 ZAP70P43403 619 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 SLF2Q8IX21 1173 aa18.96■□□□□ 0.63
TCOF1-206ENST00000445265 GPR108Q9NPR9 543 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 PSMA7O14818 248 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 LARGE1O95461 756 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 MYO1BO43795 1136 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 IQUBQ8NA54 791 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 MIGA1Q8NAN2 632 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 MLKLQ8NB16 471 aa18.95■□□□□ 0.62
TCOF1-206ENST00000445265 CYLC1P35663 651 aaPredicted RBP18.95■□□□□ 0.62
TCOF1-206ENST00000445265 NIP7Q9Y221 180 aaKnown RBP eCLIP18.95■□□□□ 0.62
TCOF1-206ENST00000445265 CYP21A2P08686 494 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 TRIM21P19474 475 aaKnown RBP18.94■□□□□ 0.62
TCOF1-206ENST00000445265 FBXO3Q9UK99 471 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 DLC1Q96QB1 1528 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 ERVV-2B6SEH9 535 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 SCRN1Q12765 414 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 ZNF589Q86UQ0 364 aaPredicted RBP18.94■□□□□ 0.62
TCOF1-206ENST00000445265 DIS3L2Q8IYB7 885 aaKnown RBP18.94■□□□□ 0.62
TCOF1-206ENST00000445265 ALS2CR12Q96Q35 445 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 CTAGE9A4FU28 777 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 PDE8AO60658 829 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 ANKARQ7Z5J8 1434 aa18.94■□□□□ 0.62
TCOF1-206ENST00000445265 SASH1O94885 1247 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 LRMPQ12912 555 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 TCIRG1Q13488 830 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 CNGA4Q8IV77 575 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 EXOC1Q9NV70 894 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 RBM28Q9NW13 759 aaKnown RBP18.93■□□□□ 0.62
TCOF1-206ENST00000445265 ZC3H13Q5T200 1668 aaKnown RBP18.93■□□□□ 0.62
TCOF1-206ENST00000445265 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 IDEP14735 1019 aa18.93■□□□□ 0.62
TCOF1-206ENST00000445265 STX17P56962 302 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms