RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PHKA1P46020 1223 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 HUNKP57058 714 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 ZNF280AP59817 542 aaPredicted RBP21.06■□□□□ 0.96
LIME1-202ENST00000444951 TTC39AQ5SRH9 613 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 TSHZ3Q63HK5 1081 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 ZNF804AQ7Z570 1209 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 ARAP2Q8WZ64 1704 aa21.06■□□□□ 0.96
LIME1-202ENST00000444951 IRS2Q9Y4H2 1338 aa21.05■□□□□ 0.96
LIME1-202ENST00000444951 CCDC102BQ68D86 513 aa21.05■□□□□ 0.96
LIME1-202ENST00000444951 DCPSQ96C86 337 aaKnown RBP21.05■□□□□ 0.96
LIME1-202ENST00000444951 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
LIME1-202ENST00000444951 PDE4AP27815 886 aa21.04■□□□□ 0.96
LIME1-202ENST00000444951 CCDC158Q5M9N0 1113 aa21.04■□□□□ 0.96
LIME1-202ENST00000444951 C15orf52Q6ZUT6 534 aaKnown RBP21.04■□□□□ 0.96
LIME1-202ENST00000444951 AGBL3Q8NEM8 1001 aa21.04■□□□□ 0.96
LIME1-202ENST00000444951 BEGAINQ9BUH8 593 aa21.04■□□□□ 0.96
LIME1-202ENST00000444951 MXD3Q9BW11 206 aa21.04■□□□□ 0.96
LIME1-202ENST00000444951 GBA2Q9HCG7 927 aaPredicted RBP21.04■□□□□ 0.96
LIME1-202ENST00000444951 CASP8AP2Q9UKL3 1982 aa21.03■□□□□ 0.96
LIME1-202ENST00000444951 FAM155AB1AL88 458 aaPredicted RBP21.03■□□□□ 0.96
LIME1-202ENST00000444951 FBXO33Q7Z6M2 555 aa21.03■□□□□ 0.96
LIME1-202ENST00000444951 FBXW7Q969H0 707 aa21.03■□□□□ 0.96
LIME1-202ENST00000444951 GPATCH3Q96I76 525 aa21.03■□□□□ 0.96
LIME1-202ENST00000444951 SCAF8Q9UPN6 1271 aaKnown RBP21.03■□□□□ 0.96
LIME1-202ENST00000444951 USP17L3A6NCW0 530 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 USP17L4A6NCW7 530 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 MX1P20591 662 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 SCARF1Q14162 830 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 ANGEL2Q5VTE6 544 aaKnown RBP21.02■□□□□ 0.96
LIME1-202ENST00000444951 USP17L1Q7RTZ2 530 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 ABHD8Q96I13 439 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 COA1Q9GZY4 146 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 CD209Q9NNX6 404 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 GNL3LQ9NVN8 582 aaKnown RBP21.02■□□□□ 0.96
LIME1-202ENST00000444951 JAG2Q9Y219 1238 aa21.02■□□□□ 0.96
LIME1-202ENST00000444951 RGS3P49796 1198 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 CHAF1AQ13111 956 aaPredicted RBP21.01■□□□□ 0.95
LIME1-202ENST00000444951 PODNQ7Z5L7 613 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 CDCA5Q96FF9 252 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 MYOZ2Q9NPC6 264 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 ECHDC1Q9NTX5 307 aa21.01■□□□□ 0.95
LIME1-202ENST00000444951 USP17L8P0C7I0 530 aa21■□□□□ 0.95
LIME1-202ENST00000444951 RGMBQ6NW40 437 aa21■□□□□ 0.95
LIME1-202ENST00000444951 SULF1Q8IWU6 871 aa21■□□□□ 0.95
LIME1-202ENST00000444951 UQCRFS1P1P0C7P4 283 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 PDE1AP54750 535 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 NOGQ13253 232 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 DACT2Q5SW24 774 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 PLEKHM2Q8IWE5 1019 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 C2orf69Q8N8R5 385 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 NDUFB9Q9Y6M9 179 aa20.99■□□□□ 0.95
LIME1-202ENST00000444951 PI16Q6UXB8 463 aa20.98■□□□□ 0.95
LIME1-202ENST00000444951 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
LIME1-202ENST00000444951 SALL3Q9BXA9 1300 aa20.98■□□□□ 0.95
LIME1-202ENST00000444951 MAP4K4O95819 1239 aaPredicted RBP20.97■□□□□ 0.95
LIME1-202ENST00000444951 IL1R1P14778 569 aa20.97■□□□□ 0.95
LIME1-202ENST00000444951 ARID4AP29374 1257 aaPredicted RBP20.97■□□□□ 0.95
LIME1-202ENST00000444951 MCAMP43121 646 aa20.97■□□□□ 0.95
LIME1-202ENST00000444951 GTF2IP78347 998 aa20.97■□□□□ 0.95
LIME1-202ENST00000444951 RASGRF1Q13972 1273 aa20.97■□□□□ 0.95
LIME1-202ENST00000444951 NBPF9Q3BBW0 867 aa20.97■□□□□ 0.95
LIME1-202ENST00000444951 TDRD7Q8NHU6 1098 aaKnown RBP20.97■□□□□ 0.95
LIME1-202ENST00000444951 DNAJC2Q99543 621 aaKnown RBP20.97■□□□□ 0.95
LIME1-202ENST00000444951 CA12O43570 354 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 ATP5JP18859 108 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 ZNF157P51786 506 aaPredicted RBP20.96■□□□□ 0.95
LIME1-202ENST00000444951 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 HMG20BQ9P0W2 317 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 STAP2Q9UGK3 403 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
LIME1-202ENST00000444951 ERC2O15083 957 aa20.95■□□□□ 0.94
LIME1-202ENST00000444951 KIF23Q02241 960 aaPredicted RBP20.95■□□□□ 0.94
LIME1-202ENST00000444951 MOB2Q70IA6 237 aa20.95■□□□□ 0.94
LIME1-202ENST00000444951 SPATA5Q8NB90 893 aa20.95■□□□□ 0.94
LIME1-202ENST00000444951 DENND2AQ9ULE3 1009 aa20.95■□□□□ 0.94
LIME1-202ENST00000444951 PAPPA2Q9BXP8 1791 aa20.95■□□□□ 0.94
LIME1-202ENST00000444951 COL1A1P02452 1464 aaPredicted RBP20.94■□□□□ 0.94
LIME1-202ENST00000444951 MYH13Q9UKX3 1938 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 SLC10A3P09131 477 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 ZAP70P43403 619 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 STRIP1Q5VSL9 837 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 TTLL5Q6EMB2 1281 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 PITPNM2Q9BZ72 1349 aa20.94■□□□□ 0.94
LIME1-202ENST00000444951 SEMA3EO15041 775 aa20.93■□□□□ 0.94
LIME1-202ENST00000444951 GLRX3O76003 335 aaKnown RBP20.93■□□□□ 0.94
LIME1-202ENST00000444951 RASAL3Q86YV0 1011 aa20.93■□□□□ 0.94
LIME1-202ENST00000444951 CCDC102AQ96A19 550 aa20.93■□□□□ 0.94
LIME1-202ENST00000444951 EDC3Q96F86 508 aaKnown RBP20.93■□□□□ 0.94
LIME1-202ENST00000444951 ZNF512BQ96KM6 892 aaPredicted RBP20.93■□□□□ 0.94
LIME1-202ENST00000444951 GOLIM4O00461 696 aa20.92■□□□□ 0.94
LIME1-202ENST00000444951 WNT10BO00744 389 aa20.92■□□□□ 0.94
LIME1-202ENST00000444951 TBC1D9Q6ZT07 1266 aa20.92■□□□□ 0.94
LIME1-202ENST00000444951 AOX1Q06278 1338 aa20.91■□□□□ 0.94
LIME1-202ENST00000444951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.91■□□□□ 0.94
LIME1-202ENST00000444951 HAUS7Q99871 368 aa20.91■□□□□ 0.94
LIME1-202ENST00000444951 MCOLN1Q9GZU1 580 aa20.91■□□□□ 0.94
LIME1-202ENST00000444951 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
LIME1-202ENST00000444951 ABCF2Q9UG63 623 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms