RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 UBP1Q9NZI7 540 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 BCS1LQ9Y276 419 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 THRAP3Q9Y2W1 955 aaKnown RBP7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TRIM37O94972 964 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TERF1P54274 439 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 POU5F1BQ06416 359 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 NEXNQ0ZGT2 675 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TCEA2Q15560 299 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZNF687Q8N1G0 1237 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MPNDQ8N594 471 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZNF513Q8N8E2 541 aaPredicted RBP7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MPHOSPH6Q99547 160 aaKnown RBP7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SUV39H2Q9H5I1 410 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SAMD9Q5K651 1589 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MRC2Q9UBG0 1479 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TIMM44O43615 452 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 LDHAP00338 332 aaKnown RBP7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ADD1P35611 737 aaKnown RBP7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 FAM160A1Q05DH4 1040 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 HIF1AQ16665 826 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MAP9Q49MG5 647 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CCDC81Q6ZN84 652 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 KRT26Q7Z3Y9 468 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SYNPO2Q9UMS6 1093 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SETD5Q9C0A6 1442 aa7.11□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RAB3GAP2Q9H2M9 1393 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 C2orf27AQ580R0 203 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PPP1R26Q5T8A7 1209 aaPredicted RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 WDR75Q8IWA0 830 aaKnown RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 GALNT12Q8IXK2 581 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CCDC116Q8IYX3 515 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 NKD1Q969G9 470 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ELP3Q9H9T3 547 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 KCNQ5Q9NR82 932 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ABCF2Q9UG63 623 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ISY1Q9ULR0 285 aaKnown RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MAPK8IP1Q9UQF2 711 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ATP8A1Q9Y2Q0 1164 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TGFBR3LH3BV60 316 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 HRO43593 1189 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 GREM1O60565 184 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 GRM5P41594 1212 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RASSF7Q02833 373 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TBC1D10BQ4KMP7 808 aaPredicted RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CCSAPQ6IQ19 270 aaPredicted RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 THAP3Q8WTV1 239 aaPredicted RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CDK15Q96Q40 435 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 NIFKQ9BYG3 293 aaKnown RBP7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 IFT122Q9HBG6 1241 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ACTR10Q9NZ32 417 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SNAPC4Q5SXM2 1469 aa7.1□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MTUS2Q5JR59 1369 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 UBAP1LF5GYI3 381 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PDE6BP35913 854 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 KCTD2Q14681 263 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SNAP47Q5SQN1 464 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZNF295-AS1Q8N0V1 137 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 GOLM1Q8NBJ4 401 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RELTQ969Z4 430 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RHOVQ96L33 236 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PDCL3Q9H2J4 239 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TRAK1Q9UPV9 953 aa7.09□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 S1PR4O95977 384 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 LDHCP07864 332 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CDKN1CP49918 316 aaPredicted RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 EIF6P56537 245 aaKnown RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MAP3K10Q02779 954 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CENPCQ03188 943 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 DALRD3Q5D0E6 543 aaKnown RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 SYNPOQ8N3V7 929 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TSR2Q969E8 191 aaKnown RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 ZNF830Q96NB3 372 aaPredicted RBP7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CRBNQ96SW2 442 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 MTRQ99707 1265 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 TMEM63CQ9P1W3 806 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 PLAAQ9Y263 795 aa7.09□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 THOC2Q8NI27 1593 aaKnown RBP7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 KIF3BO15066 747 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NPHP1O15259 732 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 RGS3P49796 1198 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CLN3Q13286 438 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 BRDTQ58F21 947 aaPredicted RBP7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 NBPF10Q6P3W6 841 aaKnown RBP7.08□□□□□ -1.28
ALMS1-IT1-201ENST00000441587 CMTR1Q8N1G2 835 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms