RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 COG6Q9Y2V7 657 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
LTBR-202ENST00000440421 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
LTBR-202ENST00000440421 FOXN1O15353 648 aa16.98■□□□□ 0.31
LTBR-202ENST00000440421 SURF6O75683 361 aaKnown RBP16.98■□□□□ 0.31
LTBR-202ENST00000440421 ZNF157P51786 506 aaPredicted RBP16.98■□□□□ 0.31
LTBR-202ENST00000440421 PRKG1Q13976 671 aa16.98■□□□□ 0.31
LTBR-202ENST00000440421 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
LTBR-202ENST00000440421 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
LTBR-202ENST00000440421 WBP1LQ9NX94 342 aa16.98■□□□□ 0.31
LTBR-202ENST00000440421 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
LTBR-202ENST00000440421 UBE2Q2LH0YL09 131 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 SEMA3EO15041 775 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 MAP2K2P36507 400 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 FKBP1BP68106 108 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
LTBR-202ENST00000440421 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 SUGT1Q9Y2Z0 365 aa16.97■□□□□ 0.31
LTBR-202ENST00000440421 MAST3O60307 1309 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 PRDX5P30044 214 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
LTBR-202ENST00000440421 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 DDX19BQ9UMR2 479 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
LTBR-202ENST00000440421 FAM155AB1AL88 458 aaPredicted RBP16.95■□□□□ 0.3
LTBR-202ENST00000440421 TCP10L2B9ZVM9 353 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 NOGQ13253 232 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 RASA3Q14644 834 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 C20orf194Q5TEA3 1177 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 PPP2R3BQ9Y5P8 575 aa16.95■□□□□ 0.3
LTBR-202ENST00000440421 LDHBP07195 334 aaKnown RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 CACNB3P54284 484 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 TNFAIP1Q13829 316 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 BEGAINQ9BUH8 593 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 NOP58Q9Y2X3 529 aaKnown RBP16.94■□□□□ 0.3
LTBR-202ENST00000440421 SALL1Q9NSC2 1324 aa16.94■□□□□ 0.3
LTBR-202ENST00000440421 PCNTO95613 3336 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 SLC10A3P09131 477 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
LTBR-202ENST00000440421 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
LTBR-202ENST00000440421 APOBEC3HQ6NTF7 200 aaKnown RBP16.93■□□□□ 0.3
LTBR-202ENST00000440421 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 MRIQ9BWK5 157 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 SSC5DA1L4H1 1573 aa16.93■□□□□ 0.3
LTBR-202ENST00000440421 TNNI2P48788 182 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
LTBR-202ENST00000440421 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 TMOD2Q9NZR1 351 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
LTBR-202ENST00000440421 LBX1P52954 281 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 CDAN1Q8IWY9 1227 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
LTBR-202ENST00000440421 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 DAGLAQ9Y4D2 1042 aa16.91■□□□□ 0.3
LTBR-202ENST00000440421 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
LTBR-202ENST00000440421 ZBTB22O15209 634 aa16.9■□□□□ 0.3
LTBR-202ENST00000440421 PPP1R12BO60237 982 aaPredicted RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 ARID4AP29374 1257 aaPredicted RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 DZIP1Q86YF9 867 aaKnown RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
LTBR-202ENST00000440421 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 LDLRAD1Q5T700 205 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
LTBR-202ENST00000440421 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
LTBR-202ENST00000440421 TEPSINQ96N21 525 aa16.89■□□□□ 0.29
LTBR-202ENST00000440421 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
LTBR-202ENST00000440421 TLR7Q9NYK1 1049 aaKnown RBP16.89■□□□□ 0.29
LTBR-202ENST00000440421 APBB1O00213 710 aa16.88■□□□□ 0.29
LTBR-202ENST00000440421 USP2O75604 605 aaPredicted RBP16.88■□□□□ 0.29
LTBR-202ENST00000440421 MCAMP43121 646 aa16.88■□□□□ 0.29
LTBR-202ENST00000440421 CDC42EP5Q6NZY7 148 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms