RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
TOP3B-206ENST00000436282 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
TOP3B-206ENST00000436282 ORC3Q9UBD5 711 aaPredicted RBP17.29■□□□□ 0.36
TOP3B-206ENST00000436282 IL2RBP14784 551 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 GTF2E1P29083 439 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-206ENST00000436282 UBXN4Q92575 508 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-206ENST00000436282 CLIC4Q9Y696 253 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 IKBKBO14920 756 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 DNAI1Q9UI46 699 aa17.28■□□□□ 0.36
TOP3B-206ENST00000436282 H7C1W4 665 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 GOLIM4O00461 696 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-206ENST00000436282 FANCCQ00597 558 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 BIN1O00499 593 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 SPTLC2O15270 562 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 SLAIN2Q9P270 581 aa17.27■□□□□ 0.36
TOP3B-206ENST00000436282 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 ZNF202O95125 648 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 TICAM2Q86XR7 235 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 ZBTB22O15209 634 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 TRIM65Q6PJ69 517 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-206ENST00000436282 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
TOP3B-206ENST00000436282 TADA3O75528 432 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-206ENST00000436282 EVCP57679 992 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
TOP3B-206ENST00000436282 TPM1P09493 284 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 HSPD1P10809 573 aaKnown RBP17.25■□□□□ 0.35
TOP3B-206ENST00000436282 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 MYSM1Q5VVJ2 828 aa17.25■□□□□ 0.35
TOP3B-206ENST00000436282 EFCAB8A8MWE9 144 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 CBFA2T2O43439 604 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 ATP8B1O43520 1251 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-206ENST00000436282 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 PUS3Q9BZE2 481 aaKnown RBP17.24■□□□□ 0.35
TOP3B-206ENST00000436282 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 TULP2O00295 520 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
TOP3B-206ENST00000436282 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 FCHSD1Q86WN1 690 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 HSD3B7Q9H2F3 369 aa17.24■□□□□ 0.35
TOP3B-206ENST00000436282 PFKFB1P16118 471 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 CMA1P23946 247 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 FBXO18Q8NFZ0 1043 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-206ENST00000436282 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 AXDND1Q5T1B0 1012 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-206ENST00000436282 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 CARD10Q9BWT7 1032 aa17.23■□□□□ 0.35
TOP3B-206ENST00000436282 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-206ENST00000436282 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
TOP3B-206ENST00000436282 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 MAST3O60307 1309 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 EYA2O00167 538 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 FANCGO15287 622 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 IL15P40933 162 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-206ENST00000436282 UBASH3AP57075 661 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 TUBE1Q9UJT0 475 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
TOP3B-206ENST00000436282 HNRNPH2P55795 449 aaKnown RBP17.22■□□□□ 0.35
TOP3B-206ENST00000436282 UBXN6Q9BZV1 441 aa17.22■□□□□ 0.35
TOP3B-206ENST00000436282 COL5A2P05997 1499 aaPredicted RBP17.21■□□□□ 0.35
TOP3B-206ENST00000436282 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 ARFGEF2Q9Y6D5 1785 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 IFIT1P09914 478 aaKnown RBP17.21■□□□□ 0.35
TOP3B-206ENST00000436282 MYL5Q02045 173 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
TOP3B-206ENST00000436282 A0A1B0GUL7 405 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 SERPINC1P01008 464 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 VSTM4Q8IW00 320 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 DNAJC10Q8IXB1 793 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 DPF2Q92785 391 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 FAM89AQ96GI7 184 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
TOP3B-206ENST00000436282 MROH7-TTC4A0A0A0MT08 1334 aa17.21■□□□□ 0.35
TOP3B-206ENST00000436282 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
TOP3B-206ENST00000436282 SPEF2Q9C093 1822 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms