RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 CACNB3P54284 484 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 SOX10P56693 466 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 SIL1Q9H173 461 aa16.4■□□□□ 0.22
CDCA4P4-201ENST00000435216 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 FGFR2P21802 821 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 GJA5P36382 358 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 TNFAIP1Q13829 316 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 ATG9AQ7Z3C6 839 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
CDCA4P4-201ENST00000435216 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
CDCA4P4-201ENST00000435216 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDCA4P4-201ENST00000435216 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
CDCA4P4-201ENST00000435216 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
CDCA4P4-201ENST00000435216 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
CDCA4P4-201ENST00000435216 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 IFNL1Q8IU54 200 aa16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 ANKRD13AQ8IZ07 590 aa16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 TEKT1Q969V4 418 aa16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 HPS5Q9UPZ3 1129 aa16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 LRRFIP2Q9Y608 721 aaKnown RBP16.37■□□□□ 0.21
CDCA4P4-201ENST00000435216 LAMB1P07942 1786 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 FKTNO75072 461 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 SLC5A1P13866 664 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 LPIN2Q92539 896 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 MEIS3Q99687 375 aa16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 PA2G4Q9UQ80 394 aaKnown RBP16.36■□□□□ 0.21
CDCA4P4-201ENST00000435216 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 TNNI2P48788 182 aa16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 HDLBPQ00341 1268 aaKnown RBP16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 CFHR5Q9BXR6 569 aa16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
CDCA4P4-201ENST00000435216 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 ALDH1A1P00352 501 aa16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 INHBEP58166 350 aa16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 APOBEC3HQ6NTF7 200 aaKnown RBP16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 ZDHHC15Q96MV8 337 aa16.34■□□□□ 0.21
CDCA4P4-201ENST00000435216 VGLL4Q14135 290 aa16.33■□□□□ 0.2
CDCA4P4-201ENST00000435216 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
CDCA4P4-201ENST00000435216 PTPN18Q99952 460 aa16.33■□□□□ 0.2
CDCA4P4-201ENST00000435216 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
CDCA4P4-201ENST00000435216 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
CDCA4P4-201ENST00000435216 MAST3O60307 1309 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 CIAO1O76071 339 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 MAP3K9P80192 1104 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 CRHR2Q13324 411 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 DIXDC1Q155Q3 683 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 TMOD2Q9NZR1 351 aa16.32■□□□□ 0.2
CDCA4P4-201ENST00000435216 PRDX5P30044 214 aa16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 ADORA1P30542 326 aa16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 PHKA1P46020 1223 aa16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 OTUD5Q96G74 571 aa16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
CDCA4P4-201ENST00000435216 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 FBXO46Q6PJ61 603 aaPredicted RBP16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 HHIPL2Q6UWX4 724 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 DAGLAQ9Y4D2 1042 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 CSADQ9Y600 493 aa16.3■□□□□ 0.2
CDCA4P4-201ENST00000435216 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 BCAR3O75815 825 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 TCP10Q12799 353 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 CCL15Q16663 113 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 OTUD7BQ6GQQ9 843 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 CD99L2Q8TCZ2 262 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 FRAT1Q92837 279 aaPredicted RBP16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 SNCAIPQ9Y6H5 919 aa16.29■□□□□ 0.2
CDCA4P4-201ENST00000435216 SRGAP3O43295 1099 aa16.28■□□□□ 0.2
CDCA4P4-201ENST00000435216 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
CDCA4P4-201ENST00000435216 TIMM10P62072 90 aa16.28■□□□□ 0.2
CDCA4P4-201ENST00000435216 NFIAQ12857 509 aa16.28■□□□□ 0.2
CDCA4P4-201ENST00000435216 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
CDCA4P4-201ENST00000435216 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms