RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 UBASH3AP57075 661 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 GNG11P61952 73 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 PDIA6Q15084 440 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 CPLX3Q8WVH0 158 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
SCAF4-203ENST00000434667 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 PFKFB1P16118 471 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 C1orf141Q5JVX7 400 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 L2HGDHQ9H9P8 463 aa12.11□□□□□ -0.47
SCAF4-203ENST00000434667 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
SCAF4-203ENST00000434667 JCADQ9P266 1359 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 PHACTR2O75167 634 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 KCNA6P17658 529 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
SCAF4-203ENST00000434667 PDE4BQ07343 736 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 HMG20BQ9P0W2 317 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 NEMFO60524 1076 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 PHKBQ93100 1093 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 M0R2C6 588 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 SPTLC2O15270 562 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 GCKRQ14397 625 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-203ENST00000434667 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
SCAF4-203ENST00000434667 OSBPL5Q9H0X9 879 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-203ENST00000434667 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
SCAF4-203ENST00000434667 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 HSPD1P10809 573 aaKnown RBP12.09□□□□□ -0.47
SCAF4-203ENST00000434667 C8orf76Q96K31 380 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 LZTFL1Q9NQ48 299 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 ARAP2Q8WZ64 1704 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 KLF18A0A0U1RQI7 1052 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
SCAF4-203ENST00000434667 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 LMAN1P49257 510 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 MCM6Q14566 821 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 PARP3Q9Y6F1 533 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
SCAF4-203ENST00000434667 A0A087WZG4 1122 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 CTAGE5O15320 804 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 WASHC4Q2M389 1173 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 GPATCH11Q8N954 259 aa12.09□□□□□ -0.47
SCAF4-203ENST00000434667 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
SCAF4-203ENST00000434667 H3BQF6 201 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■■■■□ 23.3
SCAF4-203ENST00000434667 GSDMDP57764 484 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 KRT32Q14532 448 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-203ENST00000434667 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
SCAF4-203ENST00000434667 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 TADA3O75528 432 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 GRIN1Q05586 938 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 CALCOCO1Q9P1Z2 691 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 FEZ2Q9UHY8 353 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-203ENST00000434667 ABL1P00519 1130 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 ATP5JP18859 108 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 CASP1P29466 404 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 FAM193AP78312 1265 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 ADALQ6DHV7 355 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-203ENST00000434667 DHX58Q96C10 678 aa12.08□□□□□ -0.48
SCAF4-203ENST00000434667 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
SCAF4-203ENST00000434667 TAF3Q5VWG9 929 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
SCAF4-203ENST00000434667 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
SCAF4-203ENST00000434667 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
SCAF4-203ENST00000434667 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
SCAF4-203ENST00000434667 CCDC191Q8NCU4 936 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 PARD6BQ9BYG5 372 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 MAST3O60307 1309 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 PAG1Q9NWQ8 432 aa12.07□□□□□ -0.48
SCAF4-203ENST00000434667 CPLX1O14810 134 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 TOP1P11387 765 aaKnown RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 BMP6P22004 513 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 ESCO1Q5FWF5 840 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms