RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.15□□□□□ -0.3
HOXD3-203ENST00000432796 PRMT6Q96LA8 375 aaPredicted RBP13.15□□□□□ -0.3
HOXD3-203ENST00000432796 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 CSADQ9Y600 493 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
HOXD3-203ENST00000432796 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 TNFAIP1Q13829 316 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
HOXD3-203ENST00000432796 ZMYND8Q9ULU4 1186 aaPredicted RBP13.14□□□□□ -0.31
HOXD3-203ENST00000432796 AOX1Q06278 1338 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
HOXD3-203ENST00000432796 KLRK1P26718 216 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 MAGEA10P43363 369 aaPredicted RBP13.13□□□□□ -0.31
HOXD3-203ENST00000432796 PRKCZQ05513 592 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 SNAPC2Q13487 334 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 FAM109BQ6ICB4 259 aaPredicted RBP13.13□□□□□ -0.31
HOXD3-203ENST00000432796 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 NECAB2Q7Z6G3 386 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 PAWRQ96IZ0 340 aaKnown RBP13.13□□□□□ -0.31
HOXD3-203ENST00000432796 STK31Q9BXU1 1019 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
HOXD3-203ENST00000432796 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
HOXD3-203ENST00000432796 TEPSINQ96N21 525 aa13.12□□□□□ -0.31
HOXD3-203ENST00000432796 DEFB118Q96PH6 123 aa13.12□□□□□ -0.31
HOXD3-203ENST00000432796 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
HOXD3-203ENST00000432796 PRUNE2Q8WUY3 3088 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
HOXD3-203ENST00000432796 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 IRF6O14896 467 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 CTSWP56202 376 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 UBE2OQ9C0C9 1292 aaKnown RBP13.11□□□□□ -0.31
HOXD3-203ENST00000432796 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
HOXD3-203ENST00000432796 PAK6Q9NQU5 681 aaPredicted RBP13.11□□□□□ -0.31
HOXD3-203ENST00000432796 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
HOXD3-203ENST00000432796 INHAP05111 366 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 SYN1P17600 705 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 PLA2G5P39877 138 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
HOXD3-203ENST00000432796 FCGRTP55899 365 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
HOXD3-203ENST00000432796 SNCAIPQ9Y6H5 919 aa13.1□□□□□ -0.31
HOXD3-203ENST00000432796 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
HOXD3-203ENST00000432796 ADCY3O60266 1144 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
HOXD3-203ENST00000432796 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 PPIL2Q13356 520 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 DIS3LQ8TF46 1054 aaKnown RBP13.09□□□□□ -0.31
HOXD3-203ENST00000432796 JARID2Q92833 1246 aaPredicted RBP13.09□□□□□ -0.31
HOXD3-203ENST00000432796 MYD88Q99836 296 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 GREM2Q9H772 168 aa13.09□□□□□ -0.31
HOXD3-203ENST00000432796 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
HOXD3-203ENST00000432796 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 PXYLP1Q8TE99 480 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
HOXD3-203ENST00000432796 GABRQQ9UN88 632 aa13.08□□□□□ -0.32
HOXD3-203ENST00000432796 PDHXO00330 501 aa13.07□□□□□ -0.32
HOXD3-203ENST00000432796 ELNP15502 786 aa13.07□□□□□ -0.32
HOXD3-203ENST00000432796 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
HOXD3-203ENST00000432796 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
HOXD3-203ENST00000432796 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
HOXD3-203ENST00000432796 CDH23Q9H251 3354 aa13.07□□□□□ -0.32
HOXD3-203ENST00000432796 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 BCRP11274 1271 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
HOXD3-203ENST00000432796 KCNJ4P48050 445 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 TNNI2P48788 182 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 FLT3LGP49771 235 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 FAM122AQ96E09 287 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
HOXD3-203ENST00000432796 IL16Q14005 1332 aa13.06□□□□□ -0.32
HOXD3-203ENST00000432796 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 IL1R1P14778 569 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 PPATQ06203 517 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 IRF5Q13568 498 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms