RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CILPO75339 1184 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 ALBP02768 609 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 SLURP2P0DP57 97 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 MAP3K11Q16584 847 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 KANK3Q6NY19 840 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 DPH6Q7L8W6 267 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 VPS37DQ86XT2 251 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 GATAD2BQ8WXI9 593 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 ACDQ96AP0 544 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 LNPKQ9C0E8 428 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 IGFLR1Q9H665 355 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 SH2B1Q9NRF2 756 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 GINM1Q9NU53 330 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 PCDHB5Q9Y5E4 795 aa4.93□□□□□ -1.62
HMGB1P27-201ENST00000431429 TERTO14746 1132 aaKnown RBP4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 F13A1P00488 732 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 HOXB4P17483 251 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 ARNTP27540 789 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 CDC27P30260 824 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 AFF1P51825 1210 aaKnown RBP4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 FAM160A1Q05DH4 1040 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 PPP2R3AQ06190 1150 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 TBC1D8BQ0IIM8 1120 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 SULF2Q8IWU5 870 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 MICALL1Q8N3F8 863 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 WNT8BQ93098 351 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 UBP1Q9NZI7 540 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 STRIP2Q9ULQ0 834 aa4.92□□□□□ -1.62
HMGB1P27-201ENST00000431429 NASPP49321 788 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 ZNF157P51786 506 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 SERINC3Q13530 473 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 MPP2Q14168 576 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 SNAP47Q5SQN1 464 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 HGSNATQ68CP4 663 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 BNC2Q6ZN30 1099 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 GRIN3AQ8TCU5 1115 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 DNAJC2Q99543 621 aaKnown RBP4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 LACRTQ9GZZ8 138 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 SAMM50Q9Y512 469 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 CADPSQ9ULU8 1353 aa4.91□□□□□ -1.62
HMGB1P27-201ENST00000431429 RGS9O75916 674 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 TRIM37O94972 964 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 ADAMTS2O95450 1211 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 GTF2F1P35269 517 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 PIP4K2BP78356 416 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 PTPN11Q06124 597 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 AP3B2Q13367 1082 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 IKBKEQ14164 716 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 LRRC14Q15048 493 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 NBPF6Q5VWK0 638 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 LLGL2Q6P1M3 1020 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 FBXO27Q8NI29 283 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 SHDQ96IW2 340 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 NBPF4Q96M43 638 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 HIRIP3Q9BW71 556 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 ZNF408Q9H9D4 720 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 OSGEPQ9NPF4 335 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 PPP1R1BQ9UD71 204 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 EFR3BQ9Y2G0 817 aa4.9□□□□□ -1.63
HMGB1P27-201ENST00000431429 SHISA8B8ZZ34 492 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 KLF4O43474 513 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 OIP5O43482 229 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 GSTP1P09211 210 aaKnown RBP4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 NID1P14543 1247 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 ALAS2P22557 587 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 APOBRQ0VD83 1088 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 SEPT6Q14141 434 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 SOGA3Q5TF21 947 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 MPRIPQ6WCQ1 1025 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 CHSY3Q70JA7 882 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 REC114Q7Z4M0 266 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 REXO1Q8N1G1 1221 aaKnown RBP4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 RBBP8NLQ8NC74 664 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 NUDT8Q8WV74 236 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 NKD1Q969G9 470 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 EMILIN2Q9BXX0 1053 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 MIR1-1HGQ9H1L0 117 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 KRT82Q9NSB4 513 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 PPME1Q9Y570 386 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 PRR36Q9H6K5 1346 aa4.89□□□□□ -1.63
HMGB1P27-201ENST00000431429 GFRA2O00451 464 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 EIF4EBP3O60516 100 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 STK10O94804 968 aaKnown RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 ATE1O95260 518 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 CTSBP07858 339 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 ETFBP38117 255 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 GIPRP48546 466 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 RPL6Q02878 288 aaKnown RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 SETDB1Q15047 1291 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 CCDC144BQ3MJ40 725 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 MSL1Q68DK7 614 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 GDF6Q6KF10 455 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 GIMAP6Q6P9H5 292 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 C8orf86Q6ZUL3 223 aa4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 NOP9Q86U38 636 aaKnown RBP4.88□□□□□ -1.63
HMGB1P27-201ENST00000431429 IL22RA1Q8N6P7 574 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms