RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
ATG4B-210ENST00000428861 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
ATG4B-210ENST00000428861 DENND2AQ9ULE3 1009 aa13.27□□□□□ -0.29
ATG4B-210ENST00000428861 FZD1Q9UP38 647 aa13.27□□□□□ -0.29
ATG4B-210ENST00000428861 FPGT-TNNI3KV9GXZ4 949 aa13.27□□□□□ -0.29
ATG4B-210ENST00000428861 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 HUNKP57058 714 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 GRM1Q13255 1194 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 DEFB129Q9H1M3 183 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 VEZTQ9HBM0 779 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 HMG20BQ9P0W2 317 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-210ENST00000428861 SUGT1Q9Y2Z0 365 aa13.26□□□□□ -0.29
ATG4B-210ENST00000428861 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 SALL1Q9NSC2 1324 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 SEMA3EO15041 775 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 MCAMP43121 646 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 CACNB3P54284 484 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 HDLBPQ00341 1268 aaKnown RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 RPAP2Q8IXW5 612 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 C2orf69Q8N8R5 385 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 ZNF384Q8TF68 577 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 TEKT1Q969V4 418 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
ATG4B-210ENST00000428861 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
ATG4B-210ENST00000428861 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
ATG4B-210ENST00000428861 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-210ENST00000428861 RASA3Q14644 834 aa13.24□□□□□ -0.29
ATG4B-210ENST00000428861 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-210ENST00000428861 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
ATG4B-210ENST00000428861 DAGLAQ9Y4D2 1042 aa13.24□□□□□ -0.29
ATG4B-210ENST00000428861 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
ATG4B-210ENST00000428861 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 MYO1BO43795 1136 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 LDHBP07195 334 aaKnown RBP13.23□□□□□ -0.29
ATG4B-210ENST00000428861 PRKG1Q13976 671 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 RGMBQ6NW40 437 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 HHIPL2Q6UWX4 724 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 SPATA5Q8NB90 893 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
ATG4B-210ENST00000428861 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 APBB1O00213 710 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 ECE1P42892 770 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 TMEM39BQ9GZU3 492 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 ABCF2Q9UG63 623 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
ATG4B-210ENST00000428861 MAST3O60307 1309 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 FKBP1BP68106 108 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 RASAL3Q86YV0 1011 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 CRBNQ96SW2 442 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 PCDHB15Q9Y5E8 787 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.29
ATG4B-210ENST00000428861 GAKO14976 1311 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 FOXN1O15353 648 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-210ENST00000428861 SLC10A3P09131 477 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-210ENST00000428861 MECOMQ03112 1051 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 NFIAQ12857 509 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-210ENST00000428861 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 AACSQ86V21 672 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
ATG4B-210ENST00000428861 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
ATG4B-210ENST00000428861 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
ATG4B-210ENST00000428861 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 HMMRO75330 724 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-210ENST00000428861 MAP2K2P36507 400 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 ZAP70P43403 619 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 LDLRAD1Q5T700 205 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 ZFPM1Q8IX07 1006 aa13.19□□□□□ -0.3
ATG4B-210ENST00000428861 ZGPATQ8N5A5 531 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms