RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 JRKLQ9Y4A0 524 aa18.88■□□□□ 0.61
RHBDF1-204ENST00000428730 CBFA2T2O43439 604 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 MCMDC2Q4G0Z9 681 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 AKAP2Q9Y2D5 859 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 EXOSC10Q01780 885 aaKnown RBP18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 EPHA10Q5JZY3 1008 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 MYSM1Q5VVJ2 828 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 KSR2Q6VAB6 950 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 GOLGA6L1Q8N7Z2 621 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 ABCB6Q9NP58 842 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 LZTFL1Q9NQ48 299 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 CDC27P30260 824 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 PDE4BQ07343 736 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 SART3Q15020 963 aaKnown RBP18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 SKIDA1Q1XH10 827 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 TC2NQ8N9U0 490 aa18.87■□□□□ 0.61
RHBDF1-204ENST00000428730 IVLP07476 585 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 MAGEA9P43362 315 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 BRD3Q15059 726 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 SIRT1Q96EB6 747 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 NWD1Q149M9 1564 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 NLRP6P59044 892 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 C8orf76Q96K31 380 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 YY1AP1Q9H869 796 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 POLR3EQ9NVU0 708 aa18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 DBF4Q9UBU7 674 aaPredicted RBP18.86■□□□□ 0.61
RHBDF1-204ENST00000428730 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 RHOXF2BP0C7M4 288 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 RHOXF2Q9BQY4 288 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 DBNDD2Q9BQY9 259 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 NCAPD2Q15021 1401 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 E7EWF7 191 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 CUTAO60888 179 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 YEATS4O95619 227 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 TFCP2Q12800 502 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 CTR9Q6PD62 1173 aa18.85■□□□□ 0.61
RHBDF1-204ENST00000428730 CEMIPQ8WUJ3 1361 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 SYKP43405 635 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 LRRC31Q6UY01 552 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 HDXQ7Z353 690 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 CCDC102AQ96A19 550 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 SOWAHDA6NJG2 315 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 ATP5JP18859 108 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 TBX2Q13207 712 aaPredicted RBP18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 ANO1Q5XXA6 986 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 TTLL5Q6EMB2 1281 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 MPRIPQ6WCQ1 1025 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 SRGAP1Q7Z6B7 1085 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 TUBE1Q9UJT0 475 aa18.84■□□□□ 0.61
RHBDF1-204ENST00000428730 FOXN1O15353 648 aa18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 CMA1P23946 247 aa18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 FOXP4Q8IVH2 680 aaPredicted RBP18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 AGXT2Q9BYV1 514 aa18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 GEMIN8Q9NWZ8 242 aaKnown RBP18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 TECPR2O15040 1411 aa18.83■□□□□ 0.61
RHBDF1-204ENST00000428730 HMGB1P09429 215 aaKnown RBP18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 BMP6P22004 513 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 VSNL1P62760 191 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 E2F4Q16254 413 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 SYNE3Q6ZMZ3 975 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 CLIC6Q96NY7 704 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 L1RE1Q9UN81 338 aa18.83■□□□□ 0.6
RHBDF1-204ENST00000428730 HOXB7P09629 217 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 GUCY2CP25092 1073 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 CNNM3Q8NE01 707 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 FPGT-TNNI3KV9GXZ4 949 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 STX10O60499 249 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 SHC4Q6S5L8 630 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
RHBDF1-204ENST00000428730 GOLGA6L9A6NEM1 432 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 SLC26A8Q96RN1 970 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 AIFM3Q96NN9 605 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 NEO1Q92859 1461 aa18.81■□□□□ 0.6
RHBDF1-204ENST00000428730 CORO7P57737 925 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 FMR1Q06787 632 aaKnown RBP eCLIP18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 CASP8Q14790 479 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 ZNF827Q17R98 1081 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 OLFM4Q6UX06 510 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 GPATCH11Q8N954 259 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 HNRNPLLQ8WVV9 542 aaKnown RBP18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 PCDHA5Q9Y5H7 936 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 RPS6KA5O75582 802 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 SPECC1LQ69YQ0 1117 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 FAM204AQ9H8W3 233 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 RAB21Q9UL25 225 aa18.8■□□□□ 0.6
RHBDF1-204ENST00000428730 LRRIQ3A6PVS8 624 aaPredicted RBP18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 GOLIM4O00461 696 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 USP5P45974 858 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 HAND2P61296 217 aa18.79■□□□□ 0.6
RHBDF1-204ENST00000428730 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms