RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 CRBNQ96SW2 442 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 BACH2Q9BYV9 841 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
ABCA8-202ENST00000428549 PDCL3Q9H2J4 239 aa10.53□□□□□ -0.72
ABCA8-202ENST00000428549 C5P01031 1676 aa10.52□□□□□ -0.72
ABCA8-202ENST00000428549 DYTNA2CJ06 578 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
ABCA8-202ENST00000428549 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
ABCA8-202ENST00000428549 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 DNTTIP2Q5QJE6 756 aaKnown RBP10.52□□□□□ -0.73
ABCA8-202ENST00000428549 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 KLHL10Q6JEL2 608 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 CCDC70Q6NSX1 233 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 UBE2Q1Q7Z7E8 422 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 CHPFQ8IZ52 775 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 FAM43AQ8N2R8 423 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 EXOC6Q8TAG9 804 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
ABCA8-202ENST00000428549 ZNF496Q96IT1 587 aaPredicted RBP10.52□□□□□ -0.73
ABCA8-202ENST00000428549 TMEM238LA0A1B0GVL6 79 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 PABPN1LA6NDY0 278 aaKnown RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 SCAMP3O14828 347 aaKnown RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 RRM1P23921 792 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 GNALP38405 381 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 NAP1L1P55209 391 aaKnown RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 IFT88Q13099 833 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 COL19A1Q14993 1142 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 CHCHD4Q8N4Q1 142 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 C22orf23Q9BZE7 217 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 ABCC4O15439 1325 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 SOWAHDA6NJG2 315 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 GOLGA6L6A8MZA4 724 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 NEFHP12036 1026 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 RBL2Q08999 1139 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 WASHC5Q12768 1159 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 CCDC73Q6ZRK6 1079 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 PANK1Q8TE04 598 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 TTC14Q96N46 770 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 APBA2Q99767 749 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 ASAP1Q9ULH1 1129 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 SLC45A1Q9Y2W3 748 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 RGPD3A6NKT7 1758 aaPredicted RBP10.51□□□□□ -0.73
ABCA8-202ENST00000428549 RGPD4Q7Z3J3 1758 aa10.51□□□□□ -0.73
ABCA8-202ENST00000428549 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 NPHP1O15259 732 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 RLBP1P12271 317 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 ABL2P42684 1182 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 RAPGEF1Q13905 1077 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 MVPQ14764 893 aaKnown RBP10.5□□□□□ -0.73
ABCA8-202ENST00000428549 CCDC93Q567U6 631 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 KANK3Q6NY19 840 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 SAMD3Q8N6K7 520 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 PRPF38AQ8NAV1 312 aaKnown RBP10.5□□□□□ -0.73
ABCA8-202ENST00000428549 CCDC94Q9BW85 323 aaPredicted RBP10.5□□□□□ -0.73
ABCA8-202ENST00000428549 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
ABCA8-202ENST00000428549 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 PALLDQ8WX93 1383 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 KIF1CO43896 1103 aaKnown RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 RBP3P10745 1247 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 SIM2Q14190 667 aaPredicted RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 SKAP1Q86WV1 359 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 FRS2Q8WU20 508 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 RELTQ969Z4 430 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 OSBPL2Q9H1P3 480 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 LRRC4BQ9NT99 713 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 DDX19BQ9UMR2 479 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 TNNQ9UQP3 1299 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
ABCA8-202ENST00000428549 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
ABCA8-202ENST00000428549 LOC102724428A0A0B4J2F2 783 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 RNASEH2AO75792 299 aaKnown RBP10.48□□□□□ -0.73
ABCA8-202ENST00000428549 NAT2P11245 290 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 FOSL1P15407 271 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 SIK1P57059 783 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 AMPD3Q01432 767 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 SYCP2LQ5T4T6 812 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
ABCA8-202ENST00000428549 LCA5Q86VQ0 697 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 NDUFAF2Q8N183 169 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 KIAA1958Q8N8K9 716 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 ADAMTS19Q8TE59 1207 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 ERP27Q96DN0 273 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 TEX13AQ9BXU3 409 aaPredicted RBP10.48□□□□□ -0.73
ABCA8-202ENST00000428549 DDX21Q9NR30 783 aaKnown RBP eCLIP10.48□□□□□ -0.73
ABCA8-202ENST00000428549 TYW1Q9NV66 732 aaKnown RBP10.48□□□□□ -0.73
ABCA8-202ENST00000428549 RREB1Q92766 1687 aa10.48□□□□□ -0.73
ABCA8-202ENST00000428549 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
ABCA8-202ENST00000428549 TRIM64CA6NLI5 447 aa10.47□□□□□ -0.73
ABCA8-202ENST00000428549 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
ABCA8-202ENST00000428549 TBX3O15119 743 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms