RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CLSTN1O94985 981 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 UBTFL1P0CB47 393 aaPredicted RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 TRDNQ13061 729 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 VSTM4Q8IW00 320 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 TC2NQ8N9U0 490 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 GOLGA1Q92805 767 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 PAGR1Q9BTK6 254 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 IL1RAPL2Q9NP60 686 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 WASLO00401 505 aaPredicted RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 ATP6V1AP38606 617 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 FNTAP49354 379 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 DNAAF4Q8WXU2 420 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 BCCIPQ9P287 314 aaKnown RBP eCLIP5.92□□□□□ -1.46
RIF1-203ENST00000428287 URI1O94763 535 aaPredicted RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 CCDC73Q6ZRK6 1079 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 ARHGEF25Q86VW2 580 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 NSUN7Q8NE18 718 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 KAZALD1Q96I82 304 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 UBR2Q8IWV8 1755 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 A0A0C4DFX4 3053 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 LOC102724159A0A0B4J2E5 919 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 PWP2Q15269 919 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 STK31Q9BXU1 1019 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 ANKZF1Q9H8Y5 726 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 JAK2O60674 1132 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 EIF3JO75822 258 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 NBPF7P0C2Y1 421 aaPredicted RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 EXOSC10Q01780 885 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 CASP8Q14790 479 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 NOL8Q76FK4 1167 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 RASGRP2Q7LDG7 609 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 YTHDF3Q7Z739 585 aaKnown RBP5.92□□□□□ -1.46
RIF1-203ENST00000428287 SDF4Q9BRK5 362 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 TAF6LQ9Y6J9 622 aa5.92□□□□□ -1.46
RIF1-203ENST00000428287 CAMTA1Q9Y6Y1 1673 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 EXOC5O00471 708 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 PFKFB2O60825 505 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 ZNF202O95125 648 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 CMA1P23946 247 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MCTP2Q6DN12 878 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 KCNV1Q6PIU1 500 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 AOPEPQ8N6M6 819 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 ZNF274Q96GC6 653 aaPredicted RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 USP6P35125 1406 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 RP1P56715 2156 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 ZBTB7CA1YPR0 619 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 ITIH3Q06033 890 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 PLPPR3Q6T4P5 718 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MRPS27Q92552 414 aaKnown RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 XAGE2Q96GT9 111 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 C19orf44Q9H6X5 657 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MRPL12P52815 198 aaKnown RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 AMPD2Q01433 879 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MCM10Q7L590 875 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MNS1Q8NEH6 495 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 IQSEC3Q9UPP2 1182 aaPredicted RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 PRRC2BQ5JSZ5 2229 aaKnown RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 ATP1A3P13637 1013 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 LMOD1P29536 600 aaPredicted RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 PLEKHO1Q53GL0 409 aaPredicted RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 BEND3Q5T5X7 828 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 LEKR1Q6ZMV7 388 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 PCDHA7Q9UN72 937 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 SEC16AO15027 2179 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 SPAG17Q6Q759 2223 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 POTEB2H3BUK9 544 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 HMGB1P09429 215 aaKnown RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 LMAN1P49257 510 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MYL5Q02045 173 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 KIF4BQ2VIQ3 1234 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 SPECC1LQ69YQ0 1117 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 LARP6Q9BRS8 491 aaKnown RBP5.91□□□□□ -1.46
RIF1-203ENST00000428287 GBP3Q9H0R5 595 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 IRAK1P51617 712 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 CHMP4BP1P59074 171 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 FANCCQ00597 558 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 MCM6Q14566 821 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 KIAA1217Q5T5P2 1943 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 A0A1B0GUL6 1792 aa5.91□□□□□ -1.46
RIF1-203ENST00000428287 NDUFA8P51970 172 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 HSP90AB2PQ58FF8 381 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 HOMER1Q86YM7 354 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 COG1Q8WTW3 980 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.46
RIF1-203ENST00000428287 PANX2Q96RD6 677 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 GOLPH3LQ9H4A5 285 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 SLC3A2P08195 630 aaKnown RBP5.9□□□□□ -1.46
RIF1-203ENST00000428287 SLC4A10Q6U841 1118 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 CACNA1CQ13936 2221 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 FLT4P35916 1363 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 CYP21A2P08686 494 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 USP8P40818 1118 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 COG3Q96JB2 828 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 PPP2R2CQ9Y2T4 447 aa5.9□□□□□ -1.46
RIF1-203ENST00000428287 SRRM3A6NNA2 597 aaPredicted RBP5.9□□□□□ -1.47
RIF1-203ENST00000428287 NPHP1O15259 732 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 AMPHP49418 695 aa5.9□□□□□ -1.47
RIF1-203ENST00000428287 UBASH3AP57075 661 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms