RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SOX4Q06945 474 aaPredicted RBP9.16□□□□□ -0.94
LINC00458-202ENST00000427299 NFKBIBQ15653 356 aa9.16□□□□□ -0.94
LINC00458-202ENST00000427299 NFXL1Q6ZNB6 911 aa9.16□□□□□ -0.94
LINC00458-202ENST00000427299 EZH1Q92800 747 aaPredicted RBP9.16□□□□□ -0.94
LINC00458-202ENST00000427299 PPP1R15AO75807 674 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-202ENST00000427299 FKBP4Q02790 459 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00458-202ENST00000427299 METTL22Q9BUU2 404 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-202ENST00000427299 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
LINC00458-202ENST00000427299 PRKAG2Q9UGJ0 569 aa9.15□□□□□ -0.94
LINC00458-202ENST00000427299 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
LINC00458-202ENST00000427299 ADH5P11766 374 aa9.14□□□□□ -0.95
LINC00458-202ENST00000427299 ADMP35318 185 aa9.14□□□□□ -0.95
LINC00458-202ENST00000427299 CCNJLQ8IV13 435 aa9.14□□□□□ -0.95
LINC00458-202ENST00000427299 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
LINC00458-202ENST00000427299 MTMR7Q9Y216 660 aa9.14□□□□□ -0.95
LINC00458-202ENST00000427299 A0A096LPE4 126 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 A0A1W2PPZ6 126 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 PCDH1Q08174 1060 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 ZAR1Q86SH2 424 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 CCDC82Q8N4S0 544 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 GATA6Q92908 595 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 TCF12Q99081 682 aa9.13□□□□□ -0.95
LINC00458-202ENST00000427299 CLEC4MQ9H2X3 399 aaPredicted RBP9.13□□□□□ -0.95
LINC00458-202ENST00000427299 A0A1W2PP55 124 aa9.12□□□□□ -0.95
LINC00458-202ENST00000427299 CTSBP07858 339 aa9.12□□□□□ -0.95
LINC00458-202ENST00000427299 GRIA4P48058 902 aa9.12□□□□□ -0.95
LINC00458-202ENST00000427299 ACTL7BQ9Y614 415 aa9.12□□□□□ -0.95
LINC00458-202ENST00000427299 MAOBP27338 520 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 ZNF211Q13398 564 aaPredicted RBP9.11□□□□□ -0.95
LINC00458-202ENST00000427299 CBLL1Q75N03 491 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 VSIG10LQ86VR7 867 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 GALNT12Q8IXK2 581 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 TBC1D32Q96NH3 1257 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 YIPF2Q9BWQ6 316 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 ANO2Q9NQ90 1003 aa9.11□□□□□ -0.95
LINC00458-202ENST00000427299 ABL1P00519 1130 aa9.1□□□□□ -0.95
LINC00458-202ENST00000427299 SPRED3Q2MJR0 410 aa9.1□□□□□ -0.95
LINC00458-202ENST00000427299 CARNS1A5YM72 827 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 FAM170BA6NMN3 283 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 CYP26A1O43174 497 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 CYP11A1P05108 521 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 FBXL18Q96ME1 805 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
LINC00458-202ENST00000427299 LIN7BQ9HAP6 207 aa9.09□□□□□ -0.95
LINC00458-202ENST00000427299 BSDC1Q9NW68 430 aaPredicted RBP9.09□□□□□ -0.95
LINC00458-202ENST00000427299 SEMA6CQ9H3T2 930 aa9.08□□□□□ -0.96
LINC00458-202ENST00000427299 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
LINC00458-202ENST00000427299 B3GALT4O96024 378 aa9.07□□□□□ -0.96
LINC00458-202ENST00000427299 NFICP08651 508 aa9.07□□□□□ -0.96
LINC00458-202ENST00000427299 COL19A1Q14993 1142 aa9.07□□□□□ -0.96
LINC00458-202ENST00000427299 POU4F3Q15319 338 aa9.07□□□□□ -0.96
LINC00458-202ENST00000427299 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
LINC00458-202ENST00000427299 GSX1Q9H4S2 264 aaPredicted RBP9.07□□□□□ -0.96
LINC00458-202ENST00000427299 FAM105AQ9NUU6 356 aa9.07□□□□□ -0.96
LINC00458-202ENST00000427299 ECEL1O95672 775 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 RAB6AP20340 208 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 MAP7Q14244 749 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 LCE1DQ5T752 114 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 USPL1Q5W0Q7 1092 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 EGFL7Q9UHF1 273 aa9.06□□□□□ -0.96
LINC00458-202ENST00000427299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.05□□□□□ -0.96
LINC00458-202ENST00000427299 ICMTO60725 284 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 ECM1Q16610 540 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 TP53INP2Q8IXH6 220 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 ZNF576Q9H609 170 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
LINC00458-202ENST00000427299 ITPKAP23677 461 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 CYP27A1Q02318 531 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 SEZ6L2Q6UXD5 910 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 DYMQ7RTS9 669 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 KRTAP4-7Q9BYR0 210 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 ZFYVE1Q9HBF4 777 aa9.04□□□□□ -0.96
LINC00458-202ENST00000427299 ITGB5P18084 799 aa9.03□□□□□ -0.96
LINC00458-202ENST00000427299 FZD5Q13467 585 aa9.03□□□□□ -0.96
LINC00458-202ENST00000427299 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
LINC00458-202ENST00000427299 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
LINC00458-202ENST00000427299 PAK6Q9NQU5 681 aaPredicted RBP9.03□□□□□ -0.96
LINC00458-202ENST00000427299 C1GALT1Q9NS00 363 aa9.03□□□□□ -0.96
LINC00458-202ENST00000427299 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
LINC00458-202ENST00000427299 FLCNQ8NFG4 579 aa9.02□□□□□ -0.97
LINC00458-202ENST00000427299 DDX54Q8TDD1 881 aaKnown RBP9.02□□□□□ -0.97
LINC00458-202ENST00000427299 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
LINC00458-202ENST00000427299 BRPF3Q9ULD4 1205 aa9.02□□□□□ -0.97
LINC00458-202ENST00000427299 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
LINC00458-202ENST00000427299 ARID1BQ8NFD5 2236 aaPredicted RBP9.01□□□□□ -0.97
LINC00458-202ENST00000427299 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
LINC00458-202ENST00000427299 AOC2O75106 756 aa9.01□□□□□ -0.97
LINC00458-202ENST00000427299 ASPAP45381 313 aa9.01□□□□□ -0.97
LINC00458-202ENST00000427299 AGBL5Q8NDL9 886 aa9.01□□□□□ -0.97
LINC00458-202ENST00000427299 LRRC4CQ9HCJ2 640 aa9.01□□□□□ -0.97
LINC00458-202ENST00000427299 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
LINC00458-202ENST00000427299 H3BRB1 525 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 ARHGAP4P98171 946 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 ORC1Q13415 861 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 OGFOD2Q6N063 350 aa9□□□□□ -0.97
LINC00458-202ENST00000427299 WDR18Q9BV38 432 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms