RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 DMTNQ08495 405 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
ERCC3-202ENST00000426778 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 NWD2Q9ULI1 1742 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 PNOCQ13519 176 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
ERCC3-202ENST00000426778 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 CAVIN2O95810 425 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 CDC27P30260 824 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 KIF23Q02241 960 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-202ENST00000426778 HLFQ16534 295 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 ANO1Q5XXA6 986 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 DPF2Q92785 391 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
ERCC3-202ENST00000426778 GREM2Q9H772 168 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
ERCC3-202ENST00000426778 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
ERCC3-202ENST00000426778 E4F1Q66K89 784 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-202ENST00000426778 SYT10Q6XYQ8 523 aa16.68■□□□□ 0.26
ERCC3-202ENST00000426778 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
ERCC3-202ENST00000426778 NYAP1Q6ZVC0 841 aa16.68■□□□□ 0.26
ERCC3-202ENST00000426778 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
ERCC3-202ENST00000426778 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
ERCC3-202ENST00000426778 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-202ENST00000426778 FAM177A1Q8N128 213 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-202ENST00000426778 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
ERCC3-202ENST00000426778 FOXN1O15353 648 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 ATP2B1P20020 1258 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 VPS37DQ86XT2 251 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 APPBP2Q92624 585 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 KMT5BQ4FZB7 885 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
ERCC3-202ENST00000426778 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
ERCC3-202ENST00000426778 METAP2P50579 478 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERCC3-202ENST00000426778 KCNG4Q8TDN1 519 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 ST7Q9NRC1 585 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 A0A0G2JS52 829 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 ITGA6P23229 1130 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 GLI3P10071 1580 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 NCAPHQ15003 741 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
ERCC3-202ENST00000426778 KRT40Q6A162 431 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
ERCC3-202ENST00000426778 MYO5AQ9Y4I1 1855 aaKnown RBP16.66■□□□□ 0.26
ERCC3-202ENST00000426778 TJP1Q07157 1748 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 CIAO1O76071 339 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 SFPQP23246 707 aaKnown RBP eCLIP16.65■□□□□ 0.26
ERCC3-202ENST00000426778 PHKA1P46020 1223 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 TRDNQ13061 729 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 ZBTB9Q96C00 473 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 SYKP43405 635 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 MST1RQ04912 1400 aa16.65■□□□□ 0.26
ERCC3-202ENST00000426778 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
ERCC3-202ENST00000426778 FANCCQ00597 558 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 ISCA1Q9BUE6 129 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 GRIN1Q05586 938 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 COL18A1P39060 1754 aa16.64■□□□□ 0.25
ERCC3-202ENST00000426778 NLRP12P59046 1061 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 HSD3B7Q9H2F3 369 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 KCNJ14Q9UNX9 436 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 KIF1AQ12756 1690 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
ERCC3-202ENST00000426778 YEATS4O95619 227 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 SERPINC1P01008 464 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 EVCP57679 992 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
ERCC3-202ENST00000426778 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 LONRF3Q496Y0 759 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 GRAMD1CQ8IYS0 662 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 PDILTQ8N807 584 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 SLC26A6Q9BXS9 759 aa16.63■□□□□ 0.25
ERCC3-202ENST00000426778 NEMFO60524 1076 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms