RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 NOB1Q9ULX3 412 aaKnown RBP15.96■□□□□ 0.15
SGCE-203ENST00000425444 LAMB1P07942 1786 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 TESPA1A2RU30 521 aaPredicted RBP15.95■□□□□ 0.14
SGCE-203ENST00000425444 UNCXA6NJT0 531 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 PLIN1O60240 522 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 IREB2P48200 963 aaKnown RBP15.95■□□□□ 0.14
SGCE-203ENST00000425444 SUPT20HL1Q3ZLR7 823 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 TXNRD3Q86VQ6 643 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
SGCE-203ENST00000425444 API5Q9BZZ5 524 aaKnown RBP15.95■□□□□ 0.14
SGCE-203ENST00000425444 COL1A1P02452 1464 aaPredicted RBP15.95■□□□□ 0.14
SGCE-203ENST00000425444 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 TAF1CQ15572 869 aaPredicted RBP15.94■□□□□ 0.14
SGCE-203ENST00000425444 TTLL5Q6EMB2 1281 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 ZBED3Q96IU2 234 aaPredicted RBP15.94■□□□□ 0.14
SGCE-203ENST00000425444 HTATIP2Q9BUP3 242 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 ZFYVE28Q9HCC9 887 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 NR2E3Q9Y5X4 410 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 SSC5DA1L4H1 1573 aa15.94■□□□□ 0.14
SGCE-203ENST00000425444 SNAP23O00161 211 aa15.93■□□□□ 0.14
SGCE-203ENST00000425444 SOX1O00570 391 aaPredicted RBP15.93■□□□□ 0.14
SGCE-203ENST00000425444 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
SGCE-203ENST00000425444 DLGAP5Q15398 846 aa15.93■□□□□ 0.14
SGCE-203ENST00000425444 SHISA4Q96DD7 197 aa15.93■□□□□ 0.14
SGCE-203ENST00000425444 LRCH3Q96II8 777 aa15.93■□□□□ 0.14
SGCE-203ENST00000425444 A0A1B0GUL6 1792 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 RABL6Q3YEC7 729 aaPredicted RBP15.92■□□□□ 0.14
SGCE-203ENST00000425444 NBPF12Q5TAG4 269 aaPredicted RBP15.92■□□□□ 0.14
SGCE-203ENST00000425444 ZNF804AQ7Z570 1209 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 ANKRD13AQ8IZ07 590 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 OPTNQ96CV9 577 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 ELP3Q9H9T3 547 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 PPP2R3BQ9Y5P8 575 aa15.92■□□□□ 0.14
SGCE-203ENST00000425444 LAMA2P24043 3122 aaKnown RBP15.92■□□□□ 0.14
SGCE-203ENST00000425444 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
SGCE-203ENST00000425444 A0A1W2PPC1 479 aa15.91■□□□□ 0.14
SGCE-203ENST00000425444 USP2O75604 605 aaPredicted RBP15.91■□□□□ 0.14
SGCE-203ENST00000425444 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
SGCE-203ENST00000425444 KIF22Q14807 665 aa15.91■□□□□ 0.14
SGCE-203ENST00000425444 MTFR1Q15390 333 aa15.91■□□□□ 0.14
SGCE-203ENST00000425444 ANKRD44Q8N8A2 993 aa15.91■□□□□ 0.14
SGCE-203ENST00000425444 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
SGCE-203ENST00000425444 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
SGCE-203ENST00000425444 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 CLRN2A0PK11 232 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 ZBTB7BO15156 539 aaPredicted RBP15.9■□□□□ 0.14
SGCE-203ENST00000425444 GTF2IP78347 998 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 CCL15Q16663 113 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 NKX2-3Q8TAU0 364 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 BRI3BPQ8WY22 251 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 VEZTQ9HBM0 779 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 CD209Q9NNX6 404 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 MROH5Q6ZUA9 1318 aa15.9■□□□□ 0.14
SGCE-203ENST00000425444 SPTBN5Q9NRC6 3674 aaKnown RBP15.89■□□□□ 0.13
SGCE-203ENST00000425444 TTC28Q96AY4 2481 aa15.89■□□□□ 0.13
SGCE-203ENST00000425444 MYO1BO43795 1136 aa15.89■□□□□ 0.13
SGCE-203ENST00000425444 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
SGCE-203ENST00000425444 METTL24Q5JXM2 366 aa15.89■□□□□ 0.13
SGCE-203ENST00000425444 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
SGCE-203ENST00000425444 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
SGCE-203ENST00000425444 IPO8O15397 1037 aaKnown RBP15.88■□□□□ 0.13
SGCE-203ENST00000425444 ECM2O94769 699 aaPredicted RBP15.88■□□□□ 0.13
SGCE-203ENST00000425444 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
SGCE-203ENST00000425444 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 LRRC24Q50LG9 513 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 FAM43AQ8N2R8 423 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 PCDHAC2Q9Y5I4 1007 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 ZSWIM8A7E2V4 1837 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 IRS2Q9Y4H2 1338 aa15.88■□□□□ 0.13
SGCE-203ENST00000425444 GNRH1P01148 92 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 GTF2A2P52657 109 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 UBE2Q1Q7Z7E8 422 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 ARHGAP45Q92619 1136 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 COL25A1Q9BXS0 654 aaPredicted RBP15.87■□□□□ 0.13
SGCE-203ENST00000425444 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 RIPOR2Q9Y4F9 1068 aa15.87■□□□□ 0.13
SGCE-203ENST00000425444 IL1R1P14778 569 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 GJA8P48165 433 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 PRMT2P55345 433 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 RASA3Q14644 834 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 DEFB123Q8N688 67 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 MTMR14Q8NCE2 650 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 JAG2Q9Y219 1238 aa15.86■□□□□ 0.13
SGCE-203ENST00000425444 F8W031 263 aaPredicted RBP15.85■□□□□ 0.13
SGCE-203ENST00000425444 EVI5O60447 810 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 TLR2O60603 784 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 BCAR3O75815 825 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 GJB1P08034 283 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 CCL5P13501 91 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 GYG1P46976 350 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 MEIS3Q99687 375 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
SGCE-203ENST00000425444 ZBED9Q6R2W3 1325 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms