RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 A0A0U1RQJ8 604 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 CBFA2T2O43439 604 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 RHOXF2BP0C7M4 288 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.66
PKP4-204ENST00000421462 WASHC4Q2M389 1173 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 FOXR1Q6PIV2 292 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 ATRIPQ8WXE1 791 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 RHOXF2Q9BQY4 288 aa19.14■□□□□ 0.66
PKP4-204ENST00000421462 EXOSC10Q01780 885 aaKnown RBP19.14■□□□□ 0.65
PKP4-204ENST00000421462 FAM69CQ0P6D2 419 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
PKP4-204ENST00000421462 CWC15Q9P013 229 aaKnown RBP19.14■□□□□ 0.65
PKP4-204ENST00000421462 NEURL1BA8MQ27 555 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 PTPN12Q05209 780 aaKnown RBP19.14■□□□□ 0.65
PKP4-204ENST00000421462 GCKRQ14397 625 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 VSTM4Q8IW00 320 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 KBTBD3Q8NAB2 608 aa19.14■□□□□ 0.65
PKP4-204ENST00000421462 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.13■□□□□ 0.65
PKP4-204ENST00000421462 CEMIPQ8WUJ3 1361 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 RNMTO43148 476 aaKnown RBP19.13■□□□□ 0.65
PKP4-204ENST00000421462 LEKR1Q6ZMV7 388 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 GOLGA1Q92805 767 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 PAG1Q9NWQ8 432 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 RRP15Q9Y3B9 282 aaKnown RBP19.13■□□□□ 0.65
PKP4-204ENST00000421462 ARHGAP6O43182 974 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 SLC20A2Q08357 652 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 FBXO18Q8NFZ0 1043 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 CCDC102AQ96A19 550 aa19.13■□□□□ 0.65
PKP4-204ENST00000421462 ATP2B1P20020 1258 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 CDC27P30260 824 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 PSME1Q06323 249 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 PDE4BQ07343 736 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 PLEKHO1Q53GL0 409 aaPredicted RBP19.12■□□□□ 0.65
PKP4-204ENST00000421462 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 BPIFA3Q9BQP9 254 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 MAP3K9P80192 1104 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 AXDND1Q5T1B0 1012 aaPredicted RBP19.12■□□□□ 0.65
PKP4-204ENST00000421462 HAUS7Q99871 368 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 MRFAP1Q9Y605 127 aa19.12■□□□□ 0.65
PKP4-204ENST00000421462 AKAP4Q5JQC9 854 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 CNNM3Q8NE01 707 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 TUBB4AP04350 444 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 CHMP4CQ96CF2 233 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 INTS13Q9NVM9 706 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 SALL1Q9NSC2 1324 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 YEATS4O95619 227 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 LONRF3Q496Y0 759 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 DDX21Q9NR30 783 aaKnown RBP eCLIP19.11■□□□□ 0.65
PKP4-204ENST00000421462 POLR3EQ9NVU0 708 aa19.11■□□□□ 0.65
PKP4-204ENST00000421462 A0A087WZG4 1122 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 PRC1O43663 620 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 CMA1P23946 247 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 PHKBQ93100 1093 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 MRPL44Q9H9J2 332 aaKnown RBP19.1■□□□□ 0.65
PKP4-204ENST00000421462 SOWAHDA6NJG2 315 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 IKBKBO14920 756 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 KCNJ6P48051 423 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
PKP4-204ENST00000421462 CHMP4BP1P59074 171 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 JAKMIP3Q5VZ66 844 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 ZNF274Q96GC6 653 aaPredicted RBP19.1■□□□□ 0.65
PKP4-204ENST00000421462 FAN1Q9Y2M0 1017 aa19.1■□□□□ 0.65
PKP4-204ENST00000421462 MUM1L1Q5H9M0 696 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 SHC4Q6S5L8 630 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 JCADQ9P266 1359 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 M0R2C6 588 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 KLHL10Q6JEL2 608 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 SRLQ86TD4 932 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 TMEM139Q8IV31 216 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 FOXP4Q8IVH2 680 aaPredicted RBP19.09■□□□□ 0.65
PKP4-204ENST00000421462 GRAMD1CQ8IYS0 662 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 GOLGA5Q8TBA6 731 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 NFE2L3Q9Y4A8 694 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 TXLNAP40222 546 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 RABGGTAQ92696 567 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 ZNF594Q96JF6 807 aaPredicted RBP19.09■□□□□ 0.65
PKP4-204ENST00000421462 DENND2AQ9ULE3 1009 aa19.09■□□□□ 0.65
PKP4-204ENST00000421462 TECPR2O15040 1411 aa19.08■□□□□ 0.65
PKP4-204ENST00000421462 MAST3O60307 1309 aa19.08■□□□□ 0.65
PKP4-204ENST00000421462 ACTN2P35609 894 aa19.08■□□□□ 0.65
PKP4-204ENST00000421462 KIF23Q02241 960 aaPredicted RBP19.08■□□□□ 0.65
PKP4-204ENST00000421462 KIF4BQ2VIQ3 1234 aa19.08■□□□□ 0.65
PKP4-204ENST00000421462 CCDC85AQ96PX6 553 aaPredicted RBP19.08■□□□□ 0.65
PKP4-204ENST00000421462 LRRC37A3O60309 1634 aa19.08■□□□□ 0.65
PKP4-204ENST00000421462 UBE2Q2LH0YL09 131 aa19.08■□□□□ 0.64
PKP4-204ENST00000421462 IFIT1P09914 478 aaKnown RBP19.08■□□□□ 0.64
PKP4-204ENST00000421462 RSRC2Q7L4I2 434 aaKnown RBP19.08■□□□□ 0.64
PKP4-204ENST00000421462 UBXN6Q9BZV1 441 aa19.08■□□□□ 0.64
PKP4-204ENST00000421462 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
PKP4-204ENST00000421462 ZNF569Q5MCW4 686 aa19.07■□□□□ 0.64
PKP4-204ENST00000421462 RALYLQ86SE5 291 aaKnown RBP19.07■□□□□ 0.64
PKP4-204ENST00000421462 PNKPQ96T60 521 aa19.07■□□□□ 0.64
PKP4-204ENST00000421462 NALCNQ8IZF0 1738 aa19.07■□□□□ 0.64
PKP4-204ENST00000421462 AGLP35573 1532 aa19.07■□□□□ 0.64
PKP4-204ENST00000421462 METTL16Q86W50 562 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms