RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
NUP50-205ENST00000419387 API5Q9BZZ5 524 aaKnown RBP11.81□□□□□ -0.52
NUP50-205ENST00000419387 MCOLN1Q9GZU1 580 aa11.81□□□□□ -0.52
NUP50-205ENST00000419387 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
NUP50-205ENST00000419387 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
NUP50-205ENST00000419387 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
NUP50-205ENST00000419387 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
NUP50-205ENST00000419387 CASP8AP2Q9UKL3 1982 aa11.81□□□□□ -0.52
NUP50-205ENST00000419387 EYA2O00167 538 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
NUP50-205ENST00000419387 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
NUP50-205ENST00000419387 UBTFL1P0CB47 393 aaPredicted RBP11.8□□□□□ -0.52
NUP50-205ENST00000419387 FGFR2P21802 821 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 BCAMP50895 628 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
NUP50-205ENST00000419387 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 SUPT20HL1Q3ZLR7 823 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 AOX1Q06278 1338 aa11.8□□□□□ -0.52
NUP50-205ENST00000419387 CCDC85CA6NKD9 419 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 CRKP46108 304 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 RASA3Q14644 834 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 PUM3Q15397 648 aaKnown RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
NUP50-205ENST00000419387 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 FZD1Q9UP38 647 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
NUP50-205ENST00000419387 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 UNCXA6NJT0 531 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 SLC5A1P13866 664 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
NUP50-205ENST00000419387 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 TNFAIP1Q13829 316 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 GRIK5Q16478 980 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 LPIN2Q92539 896 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 MRIQ9BWK5 157 aa11.78□□□□□ -0.52
NUP50-205ENST00000419387 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
NUP50-205ENST00000419387 CIAO1O76071 339 aa11.77□□□□□ -0.53
NUP50-205ENST00000419387 TBC1D8O95759 1140 aa11.77□□□□□ -0.53
NUP50-205ENST00000419387 IREB2P48200 963 aaKnown RBP11.77□□□□□ -0.53
NUP50-205ENST00000419387 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
NUP50-205ENST00000419387 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
NUP50-205ENST00000419387 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
NUP50-205ENST00000419387 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 TNNI2P48788 182 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 INHBEP58166 350 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
NUP50-205ENST00000419387 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 SIL1Q9H173 461 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.76□□□□□ -0.53
NUP50-205ENST00000419387 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
NUP50-205ENST00000419387 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
NUP50-205ENST00000419387 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
NUP50-205ENST00000419387 IL15P40933 162 aaPredicted RBP11.75□□□□□ -0.53
NUP50-205ENST00000419387 CTU1Q7Z7A3 348 aaKnown RBP11.75□□□□□ -0.53
NUP50-205ENST00000419387 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 ZDHHC15Q96MV8 337 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 MEIS3Q99687 375 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 CFHR5Q9BXR6 569 aa11.75□□□□□ -0.53
NUP50-205ENST00000419387 PA2G4Q9UQ80 394 aaKnown RBP11.75□□□□□ -0.53
NUP50-205ENST00000419387 GPR25O00155 361 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 GNAI3P08754 354 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 RGS19P49795 217 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
NUP50-205ENST00000419387 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 ZNF296Q8WUU4 475 aaPredicted RBP11.74□□□□□ -0.53
NUP50-205ENST00000419387 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 COPRSQ9NQ92 184 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 GNL3LQ9NVN8 582 aaKnown RBP11.74□□□□□ -0.53
NUP50-205ENST00000419387 MAST3O60307 1309 aa11.74□□□□□ -0.53
NUP50-205ENST00000419387 BCAR3O75815 825 aa11.73□□□□□ -0.53
NUP50-205ENST00000419387 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
NUP50-205ENST00000419387 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
NUP50-205ENST00000419387 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
NUP50-205ENST00000419387 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
NUP50-205ENST00000419387 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
NUP50-205ENST00000419387 TRIM27P14373 513 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 GJA5P36382 358 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 CACNB3P54284 484 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 MTX1Q13505 466 aa11.72□□□□□ -0.53
NUP50-205ENST00000419387 PKN2Q16513 984 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms