RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RPS26P11Q5JNZ5 115 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P49-201ENST00000418882 IGHA1P01876 353 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 CTSHP09668 335 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 ERCC3P19447 782 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 GSTT1P30711 240 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 DAB2P98082 770 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 GIPC2Q8TF65 315 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 UBL7Q96S82 380 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 SRCIN1Q9C0H9 1055 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 AK5Q9Y6K8 562 aa7.97□□□□□ -1.13
HMGB1P49-201ENST00000418882 ENC1O14682 589 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 GIPC1O14908 333 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 PAGE1O75459 146 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 MAOBP27338 520 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 TPTE2Q6XPS3 522 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 DCAF11Q8TEB1 546 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 FAM8A1Q9UBU6 413 aa7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 GPN3Q9UHW5 284 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P49-201ENST00000418882 GLB1P16278 677 aa7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 EIF4BP23588 611 aaKnown RBP7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 RASIP1Q5U651 963 aa7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 TMC4Q7Z404 712 aa7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 RUSC1Q9BVN2 902 aa7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 TMPRSS13Q9BYE2 586 aa7.95□□□□□ -1.14
HMGB1P49-201ENST00000418882 CELA3AP09093 270 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 FURINP09958 794 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 POU4F3Q15319 338 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 RSPO4Q2I0M5 234 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 MEI1Q5TIA1 1274 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 PDZD3Q86UT5 571 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 NECAB3Q96P71 396 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 TMEM39AQ9NV64 488 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 PPP4R2Q9NY27 417 aa7.94□□□□□ -1.14
HMGB1P49-201ENST00000418882 ITGB7P26010 798 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 PREPP48147 710 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 PSMD2Q13200 908 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 NKAPLQ5M9Q1 402 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 TP53INP1Q96A56 240 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 FRMD6Q96NE9 622 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 ZC3H12CQ9C0D7 883 aaKnown RBP7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 RNF208Q9H0X6 261 aa7.93□□□□□ -1.14
HMGB1P49-201ENST00000418882 MEGF11A6BM72 1044 aa7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 ZNF16P17020 682 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 MPRIPQ6WCQ1 1025 aa7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 ARMC10Q8N2F6 343 aa7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 FAM46AQ96IP4 442 aaKnown RBP7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 PPM1HQ9ULR3 514 aa7.92□□□□□ -1.14
HMGB1P49-201ENST00000418882 TIAF1O95411 115 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 CYP11A1P05108 521 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 DRD2P14416 443 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 BMP6P22004 513 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 XPCQ01831 940 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 SULF2Q8IWU5 870 aa7.91□□□□□ -1.14
HMGB1P49-201ENST00000418882 ZNF862O60290 1169 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 FGD1P98174 961 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 RGS22Q8NE09 1264 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 GRIN3AQ8TCU5 1115 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 ZFYVE1Q9HBF4 777 aa7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 TTF2Q9UNY4 1162 aaKnown RBP7.9□□□□□ -1.14
HMGB1P49-201ENST00000418882 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 LIG1P18858 919 aa7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 ZNF252P-AS1Q0IIN9 211 aa7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 EXOSC6Q5RKV6 272 aaKnown RBP7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 SMG8Q8ND04 991 aaKnown RBP7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 WDR18Q9BV38 432 aa7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
HMGB1P49-201ENST00000418882 DYRK3O43781 588 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 SORBS3O60504 671 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 NME2P22392 152 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 ARNTP27540 789 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 PPP2R3AQ06190 1150 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 MRPL58Q14197 206 aaKnown RBP7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 NUTM2GQ5VZR2 741 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 ANKRD34AQ69YU3 496 aa7.88□□□□□ -1.15
HMGB1P49-201ENST00000418882 AOC2O75106 756 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 ADH5P11766 374 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 PDE3AQ14432 1141 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 LDLRAD1Q5T700 205 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 C2CD4AQ8NCU7 369 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 CEP41Q9BYV8 373 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 CEP44Q9C0F1 390 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 CACNA2D2Q9NY47 1150 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 VTI1BQ9UEU0 232 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 PCDHGC5Q9Y5F6 944 aa7.87□□□□□ -1.15
HMGB1P49-201ENST00000418882 RBM47A0AV96 593 aaKnown RBP7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 SOX4Q06945 474 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 AKAP4Q5JQC9 854 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 PCNX4Q63HM2 1172 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 MAP1SQ66K74 1059 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms