RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 M0R2C6 588 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 IL1R1P14778 569 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 CYP7A1P22680 504 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 HSPA4P34932 840 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 RABEP1Q15276 862 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 OSBP2Q969R2 916 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
DEPDC4-203ENST00000416321 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 GPAA1O43292 621 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 CHGBP05060 677 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 GSTO1P78417 241 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 PTH1RQ03431 593 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 ILDR2Q71H61 639 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 HSCBQ8IWL3 235 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 MAP4K1Q92918 833 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 NOL10Q9BSC4 688 aaKnown RBP12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
DEPDC4-203ENST00000416321 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 TCRBV5S4A2TA0A5A2 114 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 ST18O60284 1047 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 GNAT2P19087 354 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 PTGER2P43116 358 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 RTFDC1Q9BY42 306 aaPredicted RBP12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
DEPDC4-203ENST00000416321 MAGEB6P1A0A0J9YX57 407 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 PPIP5K2O43314 1243 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 MBD4O95243 580 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 APPP05067 770 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 LDHCP07864 332 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 KCNA3P22001 575 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 GTF2IP78347 998 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 MECOMQ03112 1051 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 CREB3L3Q68CJ9 461 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 PSMD1Q99460 953 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 NACAP1Q9BZK3 213 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
DEPDC4-203ENST00000416321 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 ECE2O60344 883 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 PSMA5P28066 241 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 PRDX5P30044 214 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 KRT32Q14532 448 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 AOC3Q16853 763 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 NSUN4Q96CB9 384 aaKnown RBP12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 PALD1Q9ULE6 856 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
DEPDC4-203ENST00000416321 SLC27A2O14975 620 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 BAG3O95817 575 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 NECTIN1Q15223 517 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 CERS3Q8IU89 383 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 KIF2CQ99661 725 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 TAOK3Q9H2K8 898 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
DEPDC4-203ENST00000416321 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 TDO2P48775 406 aa12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 NEK4P51957 841 aa12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 LCORLQ8N3X6 602 aa12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 STRBPQ96SI9 672 aaKnown RBP12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 NAPBQ9H115 298 aa12.11□□□□□ -0.47
DEPDC4-203ENST00000416321 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 ZNF213O14771 459 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 SNX21Q969T3 373 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
DEPDC4-203ENST00000416321 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms