RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PAXIP1Q6ZW49 1069 aaPredicted RBP18.03■□□□□ 0.48
CHD1-202ENST00000414220 RHPN1Q8TCX5 695 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 CDCA5Q96FF9 252 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 PRMT6Q96LA8 375 aaPredicted RBP18.03■□□□□ 0.48
CHD1-202ENST00000414220 VEZTQ9HBM0 779 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 ABCF2Q9UG63 623 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 PPP2R3BQ9Y5P8 575 aa18.03■□□□□ 0.48
CHD1-202ENST00000414220 APBB1O00213 710 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 ARID4AP29374 1257 aaPredicted RBP18.02■□□□□ 0.48
CHD1-202ENST00000414220 ECE1P42892 770 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 CST9Q5W186 159 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 AACSQ86V21 672 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 DZIP1Q86YF9 867 aaKnown RBP18.02■□□□□ 0.48
CHD1-202ENST00000414220 SIRT2Q8IXJ6 389 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 DNAJC5GQ8N7S2 189 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 SPATA5Q8NB90 893 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 DBNDD2Q9BQY9 259 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 GBA2Q9HCG7 927 aaPredicted RBP18.02■□□□□ 0.48
CHD1-202ENST00000414220 MKRN1Q9UHC7 482 aaKnown RBP18.02■□□□□ 0.48
CHD1-202ENST00000414220 TLL2Q9Y6L7 1015 aa18.02■□□□□ 0.48
CHD1-202ENST00000414220 IFIT2P09913 472 aaKnown RBP18.01■□□□□ 0.47
CHD1-202ENST00000414220 FKBP1BP68106 108 aa18.01■□□□□ 0.47
CHD1-202ENST00000414220 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHD1-202ENST00000414220 ZNF512BQ96KM6 892 aaPredicted RBP18.01■□□□□ 0.47
CHD1-202ENST00000414220 ZDHHC15Q96MV8 337 aa18.01■□□□□ 0.47
CHD1-202ENST00000414220 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
CHD1-202ENST00000414220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
CHD1-202ENST00000414220 CLRN2A0PK11 232 aa18■□□□□ 0.47
CHD1-202ENST00000414220 RASSF10A6NK89 507 aa18■□□□□ 0.47
CHD1-202ENST00000414220 IGSF3O75054 1194 aa18■□□□□ 0.47
CHD1-202ENST00000414220 GSTO1P78417 241 aa18■□□□□ 0.47
CHD1-202ENST00000414220 SUPT20HL1Q3ZLR7 823 aa18■□□□□ 0.47
CHD1-202ENST00000414220 EAF2Q96CJ1 260 aaPredicted RBP18■□□□□ 0.47
CHD1-202ENST00000414220 HHIPL1Q96JK4 782 aa18■□□□□ 0.47
CHD1-202ENST00000414220 CRBNQ96SW2 442 aa18■□□□□ 0.47
CHD1-202ENST00000414220 DEFB129Q9H1M3 183 aa18■□□□□ 0.47
CHD1-202ENST00000414220 TDRD3Q9H7E2 651 aaKnown RBP18■□□□□ 0.47
CHD1-202ENST00000414220 IL1RAPL2Q9NP60 686 aa18■□□□□ 0.47
CHD1-202ENST00000414220 HMG20BQ9P0W2 317 aa18■□□□□ 0.47
CHD1-202ENST00000414220 ZNF70Q9UC06 446 aaPredicted RBP18■□□□□ 0.47
CHD1-202ENST00000414220 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
CHD1-202ENST00000414220 LDHCP07864 332 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 PRDX5P30044 214 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 TTLL12Q14166 644 aaPredicted RBP17.99■□□□□ 0.47
CHD1-202ENST00000414220 GRIK5Q16478 980 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 LRP2BPQ9P2M1 347 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
CHD1-202ENST00000414220 CNTNAP1P78357 1384 aa17.99■□□□□ 0.47
CHD1-202ENST00000414220 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
CHD1-202ENST00000414220 HUNKP57058 714 aa17.98■□□□□ 0.47
CHD1-202ENST00000414220 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
CHD1-202ENST00000414220 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
CHD1-202ENST00000414220 PPP1R12BO60237 982 aaPredicted RBP17.97■□□□□ 0.47
CHD1-202ENST00000414220 MCAMP43121 646 aa17.97■□□□□ 0.47
CHD1-202ENST00000414220 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
CHD1-202ENST00000414220 HOOK2Q96ED9 719 aa17.97■□□□□ 0.47
CHD1-202ENST00000414220 NOL10Q9BSC4 688 aaKnown RBP17.97■□□□□ 0.47
CHD1-202ENST00000414220 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
CHD1-202ENST00000414220 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
CHD1-202ENST00000414220 ZNF646O15015 1829 aaPredicted RBP17.97■□□□□ 0.47
CHD1-202ENST00000414220 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
CHD1-202ENST00000414220 RASA3Q14644 834 aa17.96■□□□□ 0.47
CHD1-202ENST00000414220 FKBP1CQ5VVH2 108 aa17.96■□□□□ 0.47
CHD1-202ENST00000414220 DLK2Q6UY11 383 aa17.96■□□□□ 0.47
CHD1-202ENST00000414220 DCTPP1Q9H773 170 aa17.96■□□□□ 0.47
CHD1-202ENST00000414220 SCAF8Q9UPN6 1271 aaKnown RBP17.96■□□□□ 0.47
CHD1-202ENST00000414220 TCP10L2B9ZVM9 353 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 VEGFBP49765 207 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 GRM1Q13255 1194 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 PRAMEF18Q5VWM3 479 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 APOBEC3HQ6NTF7 200 aaKnown RBP17.95■□□□□ 0.46
CHD1-202ENST00000414220 JMYQ8N9B5 988 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 FAM163AQ96GL9 167 aaPredicted RBP17.95■□□□□ 0.46
CHD1-202ENST00000414220 SNRKQ9NRH2 765 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 DAGLAQ9Y4D2 1042 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 WDR33Q9C0J8 1336 aaKnown RBP17.95■□□□□ 0.46
CHD1-202ENST00000414220 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
CHD1-202ENST00000414220 TTF1Q15361 905 aaPredicted RBP17.94■□□□□ 0.46
CHD1-202ENST00000414220 RGMBQ6NW40 437 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 FAM83AQ86UY5 434 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 GPATCH3Q96I76 525 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 CAPNS2Q96L46 248 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 USP40Q9NVE5 1235 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 TLR7Q9NYK1 1049 aaKnown RBP17.94■□□□□ 0.46
CHD1-202ENST00000414220 MYH13Q9UKX3 1938 aa17.94■□□□□ 0.46
CHD1-202ENST00000414220 BAG3O95817 575 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
CHD1-202ENST00000414220 ZNF157P51786 506 aaPredicted RBP17.93■□□□□ 0.46
CHD1-202ENST00000414220 MECOMQ03112 1051 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 CYP4F22Q6NT55 531 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 TMED8Q6PL24 325 aaPredicted RBP17.93■□□□□ 0.46
CHD1-202ENST00000414220 PI16Q6UXB8 463 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 TBC1D9Q6ZT07 1266 aa17.93■□□□□ 0.46
CHD1-202ENST00000414220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms