RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RGS3P49796 1198 aa20.11■□□□□ 0.81
TSPAN4-208ENST00000409531 FKBP1AP62942 108 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-208ENST00000409531 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
TSPAN4-208ENST00000409531 DENND2AQ9ULE3 1009 aa20.11■□□□□ 0.81
TSPAN4-208ENST00000409531 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
TSPAN4-208ENST00000409531 CDC37L1Q7L3B6 337 aa20.1■□□□□ 0.81
TSPAN4-208ENST00000409531 MYOZ2Q9NPC6 264 aa20.1■□□□□ 0.81
TSPAN4-208ENST00000409531 PSME4Q14997 1843 aa20.1■□□□□ 0.81
TSPAN4-208ENST00000409531 PDS5AQ29RF7 1337 aaKnown RBP20.09■□□□□ 0.81
TSPAN4-208ENST00000409531 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
TSPAN4-208ENST00000409531 KIAA0825Q8IV33 1275 aa20.09■□□□□ 0.81
TSPAN4-208ENST00000409531 PI4K2BQ8TCG2 481 aa20.09■□□□□ 0.81
TSPAN4-208ENST00000409531 MCAMP43121 646 aa20.08■□□□□ 0.81
TSPAN4-208ENST00000409531 TSHZ3Q63HK5 1081 aa20.08■□□□□ 0.81
TSPAN4-208ENST00000409531 CERS5Q8N5B7 392 aa20.08■□□□□ 0.81
TSPAN4-208ENST00000409531 CREBZFQ9NS37 354 aa20.08■□□□□ 0.81
TSPAN4-208ENST00000409531 HDAC9Q9UKV0 1011 aa20.08■□□□□ 0.81
TSPAN4-208ENST00000409531 TMEM88BA6NKF7 163 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 RASGRF1Q13972 1273 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 SCARF1Q14162 830 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 SPATA5Q8NB90 893 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 DCPSQ96C86 337 aaKnown RBP20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 HAUS7Q99871 368 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 BOLA2Q9H3K6 86 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 JAG2Q9Y219 1238 aa20.07■□□□□ 0.8
TSPAN4-208ENST00000409531 TTC22Q5TAA0 569 aa20.06■□□□□ 0.8
TSPAN4-208ENST00000409531 HMG20BQ9P0W2 317 aa20.06■□□□□ 0.8
TSPAN4-208ENST00000409531 TRAF5O00463 557 aa20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 WDR66Q8TBY9 1149 aa20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 DNAJC2Q99543 621 aaKnown RBP20.05■□□□□ 0.8
TSPAN4-208ENST00000409531 KRT26Q7Z3Y9 468 aa20.04■□□□□ 0.8
TSPAN4-208ENST00000409531 ZGPATQ8N5A5 531 aaKnown RBP20.04■□□□□ 0.8
TSPAN4-208ENST00000409531 TBC1D22AQ8WUA7 517 aa20.04■□□□□ 0.8
TSPAN4-208ENST00000409531 PAG1Q9NWQ8 432 aa20.04■□□□□ 0.8
TSPAN4-208ENST00000409531 MYH7P12883 1935 aa20.04■□□□□ 0.8
TSPAN4-208ENST00000409531 WNT10BO00744 389 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 ZAP70P43403 619 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 NBPF9Q3BBW0 867 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 CST9Q5W186 159 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 SNRKQ9NRH2 765 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 GGA3Q9NZ52 723 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 COL1A1P02452 1464 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 ASTN2O75129 1339 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 SALL1Q9NSC2 1324 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 DOCK2Q92608 1830 aa20.03■□□□□ 0.8
TSPAN4-208ENST00000409531 TRIM6-TRIM34B2RNG4 842 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 F8W031 263 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 IGSF3O75054 1194 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 BMP2KLQ5H9B9 411 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 ANGEL2Q5VTE6 544 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 PI16Q6UXB8 463 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 SULF1Q8IWU6 871 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 EVI5LQ96CN4 794 aa20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 MYO5AQ9Y4I1 1855 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 ZNF646O15015 1829 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-208ENST00000409531 GOLIM4O00461 696 aa20.02■□□□□ 0.79
TSPAN4-208ENST00000409531 DLGAP5Q15398 846 aa20.02■□□□□ 0.79
TSPAN4-208ENST00000409531 SPTY2D1Q68D10 685 aaPredicted RBP20.02■□□□□ 0.79
TSPAN4-208ENST00000409531 MTMR14Q8NCE2 650 aa20.02■□□□□ 0.79
TSPAN4-208ENST00000409531 ZBED3Q96IU2 234 aaPredicted RBP20.02■□□□□ 0.79
TSPAN4-208ENST00000409531 PITPNM2Q9BZ72 1349 aa20.01■□□□□ 0.79
TSPAN4-208ENST00000409531 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-208ENST00000409531 LRRFIP1Q32MZ4 808 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-208ENST00000409531 TICAM2Q86XR7 235 aa20.01■□□□□ 0.79
TSPAN4-208ENST00000409531 TTF2Q9UNY4 1162 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-208ENST00000409531 CELF2O95319 508 aaKnown RBP20■□□□□ 0.79
TSPAN4-208ENST00000409531 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
TSPAN4-208ENST00000409531 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
TSPAN4-208ENST00000409531 GSPT1P15170 499 aaKnown RBP20■□□□□ 0.79
TSPAN4-208ENST00000409531 CFAP100Q494V2 611 aa20■□□□□ 0.79
TSPAN4-208ENST00000409531 RILPL2Q969X0 211 aa20■□□□□ 0.79
TSPAN4-208ENST00000409531 ABCF2Q9UG63 623 aa20■□□□□ 0.79
TSPAN4-208ENST00000409531 SUGT1Q9Y2Z0 365 aa20■□□□□ 0.79
TSPAN4-208ENST00000409531 NDUFB9Q9Y6M9 179 aa20■□□□□ 0.79
TSPAN4-208ENST00000409531 POLR2AP24928 1970 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 ADM5C9JUS6 153 aa19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 MAP4K4O95819 1239 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 DLK2Q6UY11 383 aa19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 KBTBD3Q8NAB2 608 aa19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 LRP2BPQ9P2M1 347 aa19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 SERPINA10Q9UK55 444 aa19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 ABT1Q9ULW3 272 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-208ENST00000409531 PCNTO95613 3336 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 LDHBP07195 334 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 SDSP20132 328 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 RBM5P52756 815 aaKnown RBP eCLIP19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 MAP3K12Q12852 859 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 GRIK5Q16478 980 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 DEFB115Q30KQ5 88 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 ZSCAN25Q6NSZ9 544 aa19.98■□□□□ 0.79
TSPAN4-208ENST00000409531 TMED8Q6PL24 325 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms