RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 YEATS4O95619 227 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 KRT27Q7Z3Y8 459 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 DSCC1Q9BVC3 393 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 USP31Q70CQ4 1352 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 GPAA1O43292 621 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 KRT79Q5XKE5 535 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 PICK1Q9NRD5 415 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 EXOC1Q9NV70 894 aa19.17■□□□□ 0.66
PCDHA13-202ENST00000409494 PPP1R2P41236 205 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 TICAM2Q86XR7 235 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 NECAB1Q8N987 351 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 SEPT11Q9NVA2 429 aaKnown RBP19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 F13A1P00488 732 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 MTIF2P46199 727 aaKnown RBP19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 USO1O60763 962 aaKnown RBP19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 CCDC40Q4G0X9 1142 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 CC2D2BQ6DHV5 1058 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 CTAGE1Q96RT6 745 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 TM6SF1Q9BZW5 370 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 LEMD3Q9Y2U8 911 aa19.16■□□□□ 0.66
PCDHA13-202ENST00000409494 PTPN14Q15678 1187 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 ANGEL1Q9UNK9 670 aaKnown RBP19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 GLI2P10070 1586 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 AK2P54819 239 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 PKNOX2Q96KN3 472 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 DEXIO95424 95 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 SYCP3Q8IZU3 236 aa19.15■□□□□ 0.66
PCDHA13-202ENST00000409494 MCTP2Q6DN12 878 aa19.14■□□□□ 0.66
PCDHA13-202ENST00000409494 CLIP2Q9UDT6 1046 aa19.14■□□□□ 0.66
PCDHA13-202ENST00000409494 SSH2Q76I76 1423 aa19.14■□□□□ 0.66
PCDHA13-202ENST00000409494 RPS6KB1P23443 525 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 STAT6P42226 847 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 RBM26Q5T8P6 1007 aaKnown RBP19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 TMOD4Q9NZQ9 345 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 ARPP21Q9UBL0 812 aaPredicted RBP19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 TNS3Q68CZ2 1445 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 HEG1Q9ULI3 1381 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 PNMA6EA0A0J9YXQ4 647 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 GOLGA6L9A6NEM1 432 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 NT5C2P49902 561 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 LRRC2Q9BYS8 371 aa19.14■□□□□ 0.65
PCDHA13-202ENST00000409494 SPTLC2O15270 562 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 ZNF594Q96JF6 807 aaPredicted RBP19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 CWC15Q9P013 229 aaKnown RBP19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 DKC1O60832 514 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 BBOX1O75936 387 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 TMED8Q6PL24 325 aaPredicted RBP19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 FAM177A1Q8N128 213 aaPredicted RBP19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 MED14O60244 1454 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 ZNF165P49910 485 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 DLGAP5Q15398 846 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 CCDC174Q6PII3 467 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 PTPDC1A2A3K4 754 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 H7C1D1 291 aa19.13■□□□□ 0.65
PCDHA13-202ENST00000409494 PSMA7O14818 248 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 TEKT1Q969V4 418 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 USP48Q86UV5 1035 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 KCNQ3O43525 872 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
PCDHA13-202ENST00000409494 DIP2CQ9Y2E4 1556 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 CPSF1Q10570 1443 aaKnown RBP19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 SLC27A2O14975 620 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 PPIP5K2O43314 1243 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 APOBRQ0VD83 1088 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 KIF18AQ8NI77 898 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 GJA3Q9Y6H8 435 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 TCEANC2Q96MN5 208 aa19.11■□□□□ 0.65
PCDHA13-202ENST00000409494 DYNC1I1O14576 645 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 NCBP1Q09161 790 aaKnown RBP19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 PATL2C9JE40 543 aaKnown RBP19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 GIMAP6Q6P9H5 292 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 RAB11FIP4Q86YS3 637 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 UBXN4Q92575 508 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 ARMT1Q9H993 441 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 CNPY2Q9Y2B0 182 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 HS1BP3Q53T59 392 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 C2CD5Q86YS7 1000 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 ASAP1Q9ULH1 1129 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 ZKSCAN5Q9Y2L8 839 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 ATP10DQ9P241 1426 aa19.1■□□□□ 0.65
PCDHA13-202ENST00000409494 GOLGA6L10A6NI86 522 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 DTHD1Q6ZMT9 781 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 FMNL3Q8IVF7 1028 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 GBP3Q9H0R5 595 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 KIF5CO60282 957 aa19.09■□□□□ 0.65
PCDHA13-202ENST00000409494 TNNT1P13805 278 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms