RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NXPE4Q6UWF7 544 aa8.22□□□□□ -1.09
HMGB1P13-201ENST00000406019 E9PSI1 815 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 TIAF1O95411 115 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 ECEL1O95672 775 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 GSTM4Q03013 218 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 ALG1LQ6GMV1 187 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 SEMA6BQ9H3T3 888 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 SUGCTQ9HAC7 445 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 NLRP2Q9NX02 1062 aa8.21□□□□□ -1.1
HMGB1P13-201ENST00000406019 GLB1P16278 677 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 PREPP48147 710 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 PRR23CQ6ZRP0 262 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 RNF208Q9H0X6 261 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 RNF19AQ9NV58 838 aa8.2□□□□□ -1.1
HMGB1P13-201ENST00000406019 FCGRTP55899 365 aa8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 ANKRD34AQ69YU3 496 aa8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 FBXO33Q7Z6M2 555 aa8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 SMG8Q8ND04 991 aaKnown RBP8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 ANKRD24Q8TF21 1146 aa8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 USP26Q9BXU7 913 aa8.19□□□□□ -1.1
HMGB1P13-201ENST00000406019 LDHBP07195 334 aaKnown RBP8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 XRCC5P13010 732 aaKnown RBP8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 MAOBP27338 520 aa8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 UVSSAQ2YD98 709 aa8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 CEP41Q9BYV8 373 aa8.18□□□□□ -1.1
HMGB1P13-201ENST00000406019 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P13-201ENST00000406019 PRPF40AO75400 957 aaKnown RBP8.17□□□□□ -1.1
HMGB1P13-201ENST00000406019 PDZD3Q86UT5 571 aa8.17□□□□□ -1.1
HMGB1P13-201ENST00000406019 MYRFLQ96LU7 910 aa8.17□□□□□ -1.1
HMGB1P13-201ENST00000406019 SRCIN1Q9C0H9 1055 aa8.17□□□□□ -1.1
HMGB1P13-201ENST00000406019 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 GIPC1O14908 333 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 POU4F3Q15319 338 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 DTHD1Q6ZMT9 781 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 C12orf49Q9H741 205 aa8.16□□□□□ -1.1
HMGB1P13-201ENST00000406019 CYP11A1P05108 521 aa8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 ERCC3P19447 782 aa8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 ATP2B2Q01814 1243 aa8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 AP3B2Q13367 1082 aa8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 EXOSC6Q5RKV6 272 aaKnown RBP8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P13-201ENST00000406019 GNA15P30679 374 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 GSTT1P30711 240 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 FAM20CQ8IXL6 584 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 ZFYVE1Q9HBF4 777 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 PPM1HQ9ULR3 514 aa8.14□□□□□ -1.11
HMGB1P13-201ENST00000406019 UNCXA6NJT0 531 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 ENC1O14682 589 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 FRMD6Q96NE9 622 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 NECAB3Q96P71 396 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 DUSP9Q99956 384 aaKnown RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 GSX1Q9H4S2 264 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 TMEM39AQ9NV64 488 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 PCDHGC5Q9Y5F6 944 aa8.13□□□□□ -1.11
HMGB1P13-201ENST00000406019 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 ZNF862O60290 1169 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 USP17L7P0C7H9 530 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 ADH5P11766 374 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 DRD2P14416 443 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 TAGLNQ01995 201 aaKnown RBP8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 ZNF252P-AS1Q0IIN9 211 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 EAPPQ56P03 285 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 NUTM2GQ5VZR2 741 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
HMGB1P13-201ENST00000406019 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 FSTP19883 344 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 DDX54Q8TDD1 881 aaKnown RBP8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 WDR89Q96FK6 387 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 CYP4F12Q9HCS2 524 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 FAM8A1Q9UBU6 413 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 AKAP2Q9Y2D5 859 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 HIF3AQ9Y2N7 669 aa8.11□□□□□ -1.11
HMGB1P13-201ENST00000406019 PAGE1O75459 146 aa8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 SGO2Q562F6 1265 aa8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
HMGB1P13-201ENST00000406019 AOC2O75106 756 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 BMP3P12645 472 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 BMP6P22004 513 aa8.09□□□□□ -1.11
HMGB1P13-201ENST00000406019 DAB2P98082 770 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms