RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 CDKL5O76039 1030 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 ZNF202O95125 648 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
CLIP4-204ENST00000404424 NLRP12P59046 1061 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
CLIP4-204ENST00000404424 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 KIF6Q6ZMV9 814 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
CLIP4-204ENST00000404424 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
CLIP4-204ENST00000404424 CDHR2Q9BYE9 1310 aa12.46□□□□□ -0.41
CLIP4-204ENST00000404424 SCARF1Q14162 830 aa12.46□□□□□ -0.41
CLIP4-204ENST00000404424 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
CLIP4-204ENST00000404424 CGNQ9P2M7 1197 aaKnown RBP12.46□□□□□ -0.41
CLIP4-204ENST00000404424 ZMYM6O95789 1325 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 NEDD4P46934 1319 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 ADD2P35612 726 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 ARID5BQ14865 1188 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 SLC39A14Q15043 492 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 AXDND1Q5T1B0 1012 aaPredicted RBP12.46□□□□□ -0.42
CLIP4-204ENST00000404424 UTP14CQ5TAP6 766 aaKnown RBP12.46□□□□□ -0.42
CLIP4-204ENST00000404424 CPLX2Q6PUV4 134 aaKnown RBP12.46□□□□□ -0.42
CLIP4-204ENST00000404424 CCAR2Q8N163 923 aaKnown RBP12.46□□□□□ -0.42
CLIP4-204ENST00000404424 CCDC150Q8NCX0 1101 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 ANGEL1Q9UNK9 670 aaKnown RBP12.46□□□□□ -0.42
CLIP4-204ENST00000404424 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.42
CLIP4-204ENST00000404424 ATRNO75882 1429 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 A0A087WWV3 80 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 NRDCO43847 1150 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 KCNJ6P48051 423 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 DPCR1Q3MIW9 517 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 NBPF11Q86T75 865 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 JMYQ8N9B5 988 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-204ENST00000404424 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 COL5A2P05997 1499 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-204ENST00000404424 MYH7P12883 1935 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
CLIP4-204ENST00000404424 IKBKBO14920 756 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 PPP6R2O75170 966 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 TUBB4AP04350 444 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 CBX1P83916 185 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
CLIP4-204ENST00000404424 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 PFKFB1P16118 471 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 MCAMP43121 646 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLIP4-204ENST00000404424 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CLIP4-204ENST00000404424 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 C4AP0C0L4 1744 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 C4BP0C0L5 1744 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
CLIP4-204ENST00000404424 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
CLIP4-204ENST00000404424 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
CLIP4-204ENST00000404424 STARD3NLO95772 234 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 ZSCAN20P17040 1043 aaPredicted RBP12.43□□□□□ -0.42
CLIP4-204ENST00000404424 U2AF2P26368 475 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■■■■■ 36.5
CLIP4-204ENST00000404424 DMTNQ08495 405 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 SLC9C2Q5TAH2 1124 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 GTPBP4Q9BZE4 634 aaKnown RBP12.43□□□□□ -0.42
CLIP4-204ENST00000404424 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CLIP4-204ENST00000404424 OGFRQ9NZT2 677 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 SMC2O95347 1197 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 ITGA6P23229 1130 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 SYKP43405 635 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 NCAPHQ15003 741 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
CLIP4-204ENST00000404424 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 MYO1BO43795 1136 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 SFPQP23246 707 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLIP4-204ENST00000404424 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 VPS37DQ86XT2 251 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-204ENST00000404424 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 ZNF330Q9Y3S2 320 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-204ENST00000404424 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
CLIP4-204ENST00000404424 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
CLIP4-204ENST00000404424 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms