RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 ECEL1O95672 775 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.35
CNGA1-202ENST00000402813 COX10Q12887 443 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 DSC3Q14574 896 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 SMC1AQ14683 1233 aaKnown RBP6.65□□□□□ -1.35
CNGA1-202ENST00000402813 AGAP9Q5VTM2 703 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 CYP26C1Q6V0L0 522 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 C1orf122Q6ZSJ8 110 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 MCM10Q7L590 875 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 RASGRP2Q7LDG7 609 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 FLCNQ8NFG4 579 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 STRBPQ96SI9 672 aaKnown RBP6.65□□□□□ -1.35
CNGA1-202ENST00000402813 SNX5Q9Y5X3 404 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 NCOA2Q15596 1464 aa6.65□□□□□ -1.35
CNGA1-202ENST00000402813 SERPINB3P29508 390 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 IL31Q6EBC2 164 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 ERC1Q8IUD2 1116 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 ELOA2Q8IYF1 753 aaPredicted RBP6.64□□□□□ -1.35
CNGA1-202ENST00000402813 WDR66Q8TBY9 1149 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 TEKT1Q969V4 418 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 SMYD2Q9NRG4 433 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 PCDH10Q9P2E7 1040 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 GTF2IRD1Q9UHL9 959 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 RRP15Q9Y3B9 282 aaKnown RBP6.64□□□□□ -1.35
CNGA1-202ENST00000402813 HFM1A2PYH4 1435 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 K7ENM7 598 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 STT3AP46977 705 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 NEK3P51956 506 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 UBASH3AP57075 661 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 CCDC15Q0P6D6 951 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 BIRC3Q13489 604 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 RAB33AQ14088 237 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 MAATS1Q7Z4T9 603 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 PHC3Q8NDX5 983 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 SCLT1Q96NL6 688 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 CENPOQ9BU64 300 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 AP1M1Q9BXS5 423 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 CDH19Q9H159 772 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 DIAPH3Q9NSV4 1193 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 SAGE1Q9NXZ1 904 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 STAP2Q9UGK3 403 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 USP31Q70CQ4 1352 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 PIK3R4Q99570 1358 aa6.64□□□□□ -1.35
CNGA1-202ENST00000402813 PIK3CDO00329 1044 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 FOXN3O00409 490 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 APBA1Q02410 837 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 FKBP4Q02790 459 aaKnown RBP eCLIP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 EIF2B5Q13144 721 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 SQSTM1Q13501 440 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 TTC31Q49AM3 519 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 SWSAP1Q6NVH7 229 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 UNC5DQ6UXZ4 953 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 ANKMY2Q8IV38 441 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 ZNF579Q8NAF0 562 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 GABPB2Q8TAK5 448 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 THAP11Q96EK4 314 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PLEKHA5Q9HAU0 1116 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 TRMT1Q9NXH9 659 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PCSK1NQ9UHG2 260 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 GTF3C4Q9UKN8 822 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PA2G4Q9UQ80 394 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 LAMC3Q9Y6N6 1575 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 MIA2Q96PC5 1412 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 GOLGA6L3A6NEY3 463 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 TOR1BO14657 336 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 KIF3CO14782 793 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 CCDC172P0C7W6 258 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 MSL3P1P0C860 447 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 DNAJB2P25686 324 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 OCLNQ16625 522 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 FAM102BQ5T8I3 360 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 CTR9Q6PD62 1173 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RWDD1Q9H446 243 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RMI1Q9H9A7 625 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RASSF1Q9NS23 344 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 DNMT3AQ9Y6K1 912 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 DGKBQ9Y6T7 804 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 GPRASP1Q5JY77 1395 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 FANCIQ9NVI1 1328 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 UACAQ9BZF9 1416 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RASSF10A6NK89 507 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 FMNL1O95466 1100 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 ZNF853P0CG23 659 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 KCNA6P17658 529 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 IL4RP24394 825 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PKN2Q16513 984 aaKnown RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 NUTM2GQ5VZR2 741 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RTL10Q7L3V2 364 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 AFAP1L1Q8TED9 768 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RPAP3Q9H6T3 665 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 PDRG1Q9NUG6 133 aa6.63□□□□□ -1.35
CNGA1-202ENST00000402813 CXXC1Q9P0U4 656 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 RABL2AQ9UBK7 228 aaPredicted RBP6.63□□□□□ -1.35
CNGA1-202ENST00000402813 KTN1Q86UP2 1357 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms