RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ATP6V0A2Q9Y487 856 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 ZNF569Q5MCW4 686 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 SREK1Q8WXA9 508 aaKnown RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 BBXQ8WY36 941 aaPredicted RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 LRRC45Q96CN5 670 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.08
VAPA-202ENST00000400000 TIMM10P62072 90 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 MAP7D1Q3KQU3 841 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 APBA3O96018 575 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 MRPS27Q92552 414 aaKnown RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 PARP1P09874 1014 aaKnown RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 TMOD4Q9NZQ9 345 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 RASAL2Q9UJF2 1139 aa15.53■□□□□ 0.08
VAPA-202ENST00000400000 UBLCP1Q8WVY7 318 aaPredicted RBP15.53■□□□□ 0.08
VAPA-202ENST00000400000 NUCB1Q02818 461 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 KIFC2Q96AC6 838 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
VAPA-202ENST00000400000 FANCAO15360 1455 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 MYL10Q9BUA6 226 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 TRIM75PA6NK02 468 aa15.52■□□□□ 0.08
VAPA-202ENST00000400000 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.08
VAPA-202ENST00000400000 A0A1B0GVL5 298 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 DTHD1Q6ZMT9 781 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 CRCPO75575 148 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 AK2P54819 239 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 USTQ9Y2C2 406 aa15.52■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE15A4D2H0 777 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE8P0CG41 777 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE6Q86UF2 777 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE4Q8IX94 777 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 LARGE2Q8N3Y3 721 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 TRIM6Q9C030 488 aaPredicted RBP15.51■□□□□ 0.07
VAPA-202ENST00000400000 SPTLC2O15270 562 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 SNX16P57768 344 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 IFNKQ9P0W0 207 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 BCS1LQ9Y276 419 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 FNBP1Q96RU3 617 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
VAPA-202ENST00000400000 CNGA1P29973 690 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 USP37Q86T82 979 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 DAPK3O43293 454 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 KRT19P08727 400 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 IFRD2Q12894 506 aaPredicted RBP15.51■□□□□ 0.07
VAPA-202ENST00000400000 AKAP4Q5JQC9 854 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 PIK3AP1Q6ZUJ8 805 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
VAPA-202ENST00000400000 NACA2Q9H009 215 aa15.51■□□□□ 0.07
VAPA-202ENST00000400000 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 KSR2Q6VAB6 950 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE9A4FU28 777 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 KCNG4Q8TDN1 519 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 VPS16Q9H269 839 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 NOP56O00567 594 aaKnown RBP15.5■□□□□ 0.07
VAPA-202ENST00000400000 ABL1P00519 1130 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 CEP83Q9Y592 693 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 PDIA4P13667 645 aaKnown RBP15.5■□□□□ 0.07
VAPA-202ENST00000400000 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 E7EVH7 732 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
VAPA-202ENST00000400000 PAGR1Q9BTK6 254 aa15.5■□□□□ 0.07
VAPA-202ENST00000400000 TACC1O75410 805 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 TXKP42681 527 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 CCDC42Q96M95 316 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 FAM47CQ5HY64 1035 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 CFAP157Q5JU67 520 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 PSMB7Q99436 277 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 PLVAPQ9BX97 442 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 TRIM31Q9BZY9 425 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 NCOA5Q9HCD5 579 aaKnown RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 CCDC117Q8IWD4 279 aaPredicted RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 SEC62Q99442 399 aaKnown RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 PYM1Q9BRP8 204 aaKnown RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 BIRC2Q13490 618 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 VPS18Q9P253 973 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 TRAF5O00463 557 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 MNAT1P51948 309 aa15.49■□□□□ 0.07
VAPA-202ENST00000400000 MRPL50Q8N5N7 158 aaKnown RBP15.49■□□□□ 0.07
VAPA-202ENST00000400000 PTPROQ16827 1216 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 HS2ST1Q7LGA3 356 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 CTAGE1Q96RT6 745 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 OTUD7BQ6GQQ9 843 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 TMTC2Q8N394 836 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 F13A1P00488 732 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 KIF5AQ12840 1032 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 DYMQ7RTS9 669 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 POTEB2H3BUK9 544 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 ITGA6P23229 1130 aa15.48■□□□□ 0.07
VAPA-202ENST00000400000 PSMD6Q15008 389 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms