RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
CPSF7-202ENST00000394888 IGDCC4Q8TDY8 1250 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 DDX19AQ9NUU7 478 aaKnown RBP18.1■□□□□ 0.49
CPSF7-202ENST00000394888 PYCARDQ9ULZ3 195 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 DUOX1Q9NRD9 1551 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 ANKRD18BA2A2Z9 1011 aa18.09■□□□□ 0.49
CPSF7-202ENST00000394888 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
CPSF7-202ENST00000394888 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
CPSF7-202ENST00000394888 TRMT112Q9UI30 125 aaKnown RBP18.09■□□□□ 0.49
CPSF7-202ENST00000394888 CDC27P30260 824 aa18.09■□□□□ 0.49
CPSF7-202ENST00000394888 HMGN5P82970 282 aaKnown RBP18.09■□□□□ 0.49
CPSF7-202ENST00000394888 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
CPSF7-202ENST00000394888 CCDC192P0DO97 292 aa18.09■□□□□ 0.49
CPSF7-202ENST00000394888 CRKLP46109 303 aaKnown RBP18.09■□□□□ 0.49
CPSF7-202ENST00000394888 THSD7AQ9UPZ6 1657 aa18.08■□□□□ 0.49
CPSF7-202ENST00000394888 SH2B2O14492 632 aaPredicted RBP18.08■□□□□ 0.49
CPSF7-202ENST00000394888 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.49
CPSF7-202ENST00000394888 CLIC4Q9Y696 253 aa18.08■□□□□ 0.49
CPSF7-202ENST00000394888 RANBP6O60518 1105 aaKnown RBP18.08■□□□□ 0.48
CPSF7-202ENST00000394888 RAB11FIP4Q86YS3 637 aa18.08■□□□□ 0.48
CPSF7-202ENST00000394888 AIFM3Q96NN9 605 aa18.08■□□□□ 0.48
CPSF7-202ENST00000394888 SLC9C2Q5TAH2 1124 aa18.08■□□□□ 0.48
CPSF7-202ENST00000394888 ADGRA1Q86SQ6 560 aa18.08■□□□□ 0.48
CPSF7-202ENST00000394888 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 TNMDQ9H2S6 317 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 PCDHA7Q9UN72 937 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 MROH7-TTC4A0A0A0MT08 1334 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 SMIM22K7EJ46 135 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 WASHC4Q2M389 1173 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 DHX40Q8IX18 779 aaKnown RBP18.07■□□□□ 0.48
CPSF7-202ENST00000394888 AK7Q96M32 723 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 CEBPZQ03701 1054 aaKnown RBP18.07■□□□□ 0.48
CPSF7-202ENST00000394888 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
CPSF7-202ENST00000394888 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 FBXO18Q8NFZ0 1043 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 ZNF384Q8TF68 577 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
CPSF7-202ENST00000394888 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 EXOC5O00471 708 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 PUM3Q15397 648 aaKnown RBP18.06■□□□□ 0.48
CPSF7-202ENST00000394888 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.06■□□□□ 0.48
CPSF7-202ENST00000394888 KIAA1524Q8TCG1 905 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 MROH5Q6ZUA9 1318 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 ALX1Q15699 326 aa18.06■□□□□ 0.48
CPSF7-202ENST00000394888 AXDND1Q5T1B0 1012 aaPredicted RBP18.06■□□□□ 0.48
CPSF7-202ENST00000394888 LPIN2Q92539 896 aa18.05■□□□□ 0.48
CPSF7-202ENST00000394888 NRBP1Q9UHY1 535 aa18.05■□□□□ 0.48
CPSF7-202ENST00000394888 DNAJC25Q9H1X3 360 aa18.05■□□□□ 0.48
CPSF7-202ENST00000394888 GSG1L2A8MUP6 293 aa18.05■□□□□ 0.48
CPSF7-202ENST00000394888 CTNNA3Q9UI47 895 aa18.05■□□□□ 0.48
CPSF7-202ENST00000394888 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 KIF23Q02241 960 aaPredicted RBP18.04■□□□□ 0.48
CPSF7-202ENST00000394888 CCAR1Q8IX12 1150 aaKnown RBP18.04■□□□□ 0.48
CPSF7-202ENST00000394888 SPATA5Q8NB90 893 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 NCOA7Q8NI08 942 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 CCDC87Q9NVE4 849 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 H3BQV1 296 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 CNNM1Q9NRU3 951 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 CFAP45Q9UL16 551 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
CPSF7-202ENST00000394888 CCDC144BQ3MJ40 725 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 CCDC144CPQ8IYA2 1237 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-202ENST00000394888 MAP3K14Q99558 947 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 KCNQ2O43526 872 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 APOA5Q6Q788 366 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 ZNF213O14771 459 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 PRKAB2O43741 272 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-202ENST00000394888 SIK1P57059 783 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 POLR3EQ9NVU0 708 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
CPSF7-202ENST00000394888 DDX60LQ5H9U9 1706 aaKnown RBP18.02■□□□□ 0.48
CPSF7-202ENST00000394888 TPM2P07951 284 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 SGMS1Q86VZ5 419 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.48
CPSF7-202ENST00000394888 ZNF75DP51815 510 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 NDUFA8P51970 172 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 PTPAQ15257 358 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
CPSF7-202ENST00000394888 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.47
CPSF7-202ENST00000394888 HSD3B7Q9H2F3 369 aa18.02■□□□□ 0.47
CPSF7-202ENST00000394888 THRAP3Q9Y2W1 955 aaKnown RBP18.02■□□□□ 0.47
CPSF7-202ENST00000394888 B4E1Z4 1266 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 KIAA2012Q0VF49 1180 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 LCORLQ8N3X6 602 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-202ENST00000394888 RXRAP19793 462 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 BCAMP50895 628 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms