RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CCDC158Q5M9N0 1113 aa19.33■□□□□ 0.69
SIPA1-201ENST00000394224 IL17RAQ96F46 866 aa19.33■□□□□ 0.69
SIPA1-201ENST00000394224 COPRSQ9NQ92 184 aa19.33■□□□□ 0.69
SIPA1-201ENST00000394224 MAPK8IP1Q9UQF2 711 aa19.33■□□□□ 0.69
SIPA1-201ENST00000394224 C3P01024 1663 aa19.33■□□□□ 0.68
SIPA1-201ENST00000394224 HOXB7P09629 217 aa19.33■□□□□ 0.68
SIPA1-201ENST00000394224 RFX5P48382 616 aaPredicted RBP19.33■□□□□ 0.68
SIPA1-201ENST00000394224 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
SIPA1-201ENST00000394224 ADALQ6DHV7 355 aa19.33■□□□□ 0.68
SIPA1-201ENST00000394224 VPS37DQ86XT2 251 aa19.33■□□□□ 0.68
SIPA1-201ENST00000394224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.33■□□□□ 0.68
SIPA1-201ENST00000394224 ST5P78524 1137 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 CDC27P30260 824 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 METAP2P50579 478 aaKnown RBP eCLIP19.32■□□□□ 0.681e-7■■■■□ 23.4
SIPA1-201ENST00000394224 FKBP15Q5T1M5 1219 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 WDR24Q96S15 920 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 NAA16Q6N069 864 aaPredicted RBP19.32■□□□□ 0.68
SIPA1-201ENST00000394224 RBM43Q6ZSC3 357 aaKnown RBP19.32■□□□□ 0.68
SIPA1-201ENST00000394224 SMARCC2Q8TAQ2 1214 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 XAGE2Q96GT9 111 aa19.32■□□□□ 0.68
SIPA1-201ENST00000394224 GPAA1O43292 621 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 METTL24Q5JXM2 366 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 FBXO18Q8NFZ0 1043 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 RABEP2Q9H5N1 569 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 PCDHA5Q9Y5H7 936 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 TRIM29Q14134 588 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 PROSER2Q86WR7 435 aaPredicted RBP19.31■□□□□ 0.68
SIPA1-201ENST00000394224 CNNM1Q9NRU3 951 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 PDE4BQ07343 736 aa19.31■□□□□ 0.68
SIPA1-201ENST00000394224 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
SIPA1-201ENST00000394224 ATG9AQ7Z3C6 839 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 PLEKHA4Q9H4M7 779 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 CYP27B1O15528 508 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 USPL1Q5W0Q7 1092 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 KRT40Q6A162 431 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 TOGARAM2Q6ZUX3 1019 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
SIPA1-201ENST00000394224 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
SIPA1-201ENST00000394224 HMGB1P09429 215 aaKnown RBP19.3■□□□□ 0.68
SIPA1-201ENST00000394224 RHOXF2BP0C7M4 288 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 GSDMDP57764 484 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 USP49Q70CQ1 688 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 MIGA1Q8NAN2 632 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 RHOXF2Q9BQY4 288 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 RICTORQ6R327 1708 aa19.3■□□□□ 0.68
SIPA1-201ENST00000394224 NBPF26B4DH59 902 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 NBPF14Q5TI25 921 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 NBPF10Q6P3W6 841 aaKnown RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 NBPF15Q8N660 670 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 PNMA6AP0CW24 399 aaPredicted RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 EXOSC10Q01780 885 aaKnown RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 CERS3Q8IU89 383 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 SUGCTQ9HAC7 445 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 NR5A1Q13285 461 aa19.29■□□□□ 0.68
SIPA1-201ENST00000394224 SAMSN1Q9NSI8 373 aaKnown RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 MORC2Q9Y6X9 1032 aaPredicted RBP19.29■□□□□ 0.68
SIPA1-201ENST00000394224 FANCGO15287 622 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 PHKG2P15735 406 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 LMAN1P49257 510 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 ZMYM1Q5SVZ6 1142 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 LDHAL6AQ6ZMR3 332 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 SMIM22K7EJ46 135 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 GUCY1A2P33402 732 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 NCOA7Q8NI08 942 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 KCNG4Q8TDN1 519 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 NRXN3Q9Y4C0 1643 aa19.28■□□□□ 0.68
SIPA1-201ENST00000394224 ERCC3P19447 782 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 HNRNPH2P55795 449 aaKnown RBP19.27■□□□□ 0.68
SIPA1-201ENST00000394224 ETF1P62495 437 aaKnown RBP19.27■□□□□ 0.68
SIPA1-201ENST00000394224 BMS1Q14692 1282 aaKnown RBP19.27■□□□□ 0.68
SIPA1-201ENST00000394224 PLEKHG1Q9ULL1 1385 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 NEMFO60524 1076 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 PRR29P0C7W0 189 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 TOM1L2Q6ZVM7 507 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 CYB5R4Q7L1T6 521 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 IFNL2Q8IZJ0 200 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 NFE2L3Q9Y4A8 694 aa19.27■□□□□ 0.68
SIPA1-201ENST00000394224 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.67
SIPA1-201ENST00000394224 EYA2O00167 538 aa19.27■□□□□ 0.67
SIPA1-201ENST00000394224 CASQ1P31415 396 aa19.27■□□□□ 0.67
SIPA1-201ENST00000394224 CCT6AP40227 531 aaKnown RBP19.27■□□□□ 0.67
SIPA1-201ENST00000394224 NLRP12P59046 1061 aa19.27■□□□□ 0.67
SIPA1-201ENST00000394224 SHC4Q6S5L8 630 aa19.27■□□□□ 0.67
SIPA1-201ENST00000394224 FOXP4Q8IVH2 680 aaPredicted RBP19.27■□□□□ 0.67
SIPA1-201ENST00000394224 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
SIPA1-201ENST00000394224 ANTXR2P58335 489 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 TMEM67Q5HYA8 995 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 SARM1Q6SZW1 724 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 RTEL1Q9NZ71 1219 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 BAZ2BQ9UIF8 2168 aaKnown RBP19.26■□□□□ 0.67
SIPA1-201ENST00000394224 ERBB3P21860 1342 aa19.26■□□□□ 0.67
SIPA1-201ENST00000394224 KIF23Q02241 960 aaPredicted RBP19.26■□□□□ 0.67
SIPA1-201ENST00000394224 DHX58Q96C10 678 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms